Listeria ivanovii subsp. londoniensis WSLC 30151: JL53_07380
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Entry
JL53_07380 CDS
T03402
Symbol
polC
Name
(GenBank) DNA polymerase III PolC
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
lio
Listeria ivanovii subsp. londoniensis WSLC 30151
Pathway
lio03030
DNA replication
lio03430
Mismatch repair
lio03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lio00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JL53_07380 (polC)
03430 Mismatch repair
JL53_07380 (polC)
03440 Homologous recombination
JL53_07380 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lio03032
]
JL53_07380 (polC)
03400 DNA repair and recombination proteins [BR:
lio03400
]
JL53_07380 (polC)
Enzymes [BR:
lio01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JL53_07380 (polC)
DNA replication proteins [BR:
lio03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JL53_07380 (polC)
DNA repair and recombination proteins [BR:
lio03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JL53_07380 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
DNA_pol3_finger
PHP
DNA_pol3_a_NII
DNA_pol3_a_NI
tRNA_anti-codon
HHH_6
RNase_H_2
HHH_3
Rv2179c-like
DEDDh_C
Peripla_BP_1
Motif
Other DBs
NCBI-ProteinID:
AIS62550
LinkDB
All DBs
Position
1500112..1504446
Genome browser
AA seq
1444 aa
AA seq
DB search
MTAKEEEKQERFQLLMTQIGLEDVVTYEEFTKEAKIEKLVADKKNKTWQFHLHVPQIFPA
ALFHMMDVGMKRAFSEIATTEMQIVPENQTINETLIQDYWNLIVEPISKQSPMIGKLLLE
QKPTFKEPHFMEIAVHNDMEETTIQQRFQAKIIESYGSAGFPRLALKTHILDQSETEEYK
AFAQAKIEEDQKKAAEAVQVMQKRQVEAQNGSTAATPLSGPFQIGYKIKDDEEIKRLGDV
YDEERRITVQGLIFATEIRELRSGRSLLQFKITDYTSSMIIKMFSRDNEDAAMFQNLKKG
MWVKVRGSVQNDTFVRDLIMMAQDINEIAGVKRLDKAEEKRAELHLHSPMSQMDATSSVD
SLFKQAADWGHKAIAITDHSVAQSFPEAYGAGQKYGLKVIFGIEANLIDDGVPIAYNDQH
ILLKDATYCVFDVETTGLSAVYDTIIELAGVKMKNGEIIDKFEAFIDPGHPLSATTINLT
GITDDMVKGSDPIDVVLQRFKEWSADDILVAHNASFDMGFINTAYEKVGIPKAENAVVDT
LELARFLYPHFKNHRLNTLTKKFNIILEQHHRAVFDAEATAYLAWKLIKDAKEMHDIDYH
DSLNDYMGEGDAYKRARPFHATIYAQTAVGLKNLFKLITMSNINYFYRVPRIPRSQLKKL
REGLIIGTACSQGELFEAMMQKGMLAAEKVAEFYDFIEIQPKPVYAPLIERELVRDEKAL
EEILKNIVRVGEKTGKPVVATGNVHYKDPVDKIYRKILIHSQGGANPLNRAELPDVHFRS
TDEMLKEFAFLGEEKAKEVVVTNSNLVVDWMEELKPIKDELYTPKIDGAEDEVRNMSYNM
AHQLYGEKLPEIVEARLEKELKSIIGHGFAVIYLISHKLVKKSLVDGYLVGSRGSVGSSF
VATMTEITEVNPLPPHYLCPNCQDSEFFDDGSIGSGFDLPDKDCPHCGTAYQKEGQDIPF
ETFLGFKGDKVPDIDLNFSGDYQPVAHAYTKEIFGEDYVFRAGTIGTVAEKTAFGYVRNY
ERDMNMTIRGAEIDRLVAGCTGVKRTTGQHPGGIIVIPNYMDVYDFTPVQFPADATDSEW
KTTHFDFHSIHDNVLKLDILGHDDPTAIRMLQDLSGIDPKTIPTDDPDVMKLFGSTESLG
VKPADIDSKTGTLGIPEFGTRFVRQMLEQTKPTTFSELVQISGLSHGTDVWLGNAEELIK
NKTCELPDVIGCRDDIMVFLIYQGLESSLAFKIMESVRKGKGLTEEMEEAMMANNVPLWY
IESCKKIKYMFPKAHAAAYVLMAVRIAYFKVHYPLYFYATYFTVRADDFDLTSMVNGKEA
VKATMKEVNDKGMEASTKEKNLLTVLEIANEMLARGFHFQKVDLYKSSADEFIIDGDSLI
PPFNAIPSLGTNVAKQIVAARENGEFLSKEDLQQRGKVSKTIIQYMDDQGCLEGLPDQNQ
LSLF
NT seq
4335 nt
NT seq
+upstream
nt +downstream
nt
atgactgctaaagaggaagaaaaacaagagcgatttcagctgctaatgacacaaattggc
ttagaagatgtagttacttatgaggaatttacaaaagaagctaaaatagaaaaactagta
gctgataaaaaaaataagacatggcaattccatttgcatgtcccacaaatttttccagcg
gcgcttttccatatgatggacgttggaatgaaacgagcttttagtgaaatcgccacaaca
gaaatgcaaatagtccctgaaaaccaaaccattaacgagacactcattcaagactattgg
aatttaattgtagagccaattagtaaacaatctcctatgattggcaaattgctcttagaa
caaaagcctacatttaaggaaccacattttatggagattgccgtgcataatgacatggaa
gaaacaactattcaacaaagattccaagcaaaaattattgaaagttatggaagtgccggg
tttccacgtttggcgctgaaaacacatattttagaccaatctgaaacagaagaatataaa
gcatttgcacaagcaaaaatagaagaagatcagaaaaaagcagccgaggcagttcaagta
atgcaaaaacgtcaagtagaggcccaaaatggaagtaccgctgcaacaccgctttcgggt
ccattccaaatcggctataaaattaaagatgatgaggaaatcaaacgcctaggagatgtt
tacgatgaagaacgacgcatcacagttcaaggtttgatttttgcaacggaaattagagag
ctccgcagtggtcgtagccttttacaatttaaaattaccgattatactagctcgatgatt
attaaaatgttttcccgtgataatgaagatgcagcaatgtttcaaaatttaaaaaaaggc
atgtgggtgaaagttcgcggtagtgttcaaaatgatacttttgttcgggacttgattatg
atggcgcaagatataaatgaaatcgctggagtgaaacgtcttgataaagcggaagaaaaa
cgcgcagaactacatctacattcaccaatgagccaaatggatgcgacgtcttctgttgat
tcactcttcaaacaagctgcggattggggccataaagcgattgcgattaccgatcattct
gtagcgcaatctttcccggaagcatatggggctgggcagaaatatggcttaaaagttatt
tttggtatcgaagcgaatttgattgatgatggagtgccaatcgcatataacgaccaacat
attctactgaaagatgccacttattgcgtatttgacgtggaaacgacagggctatcagct
gtttatgatacgattatcgaattagctggagtaaaaatgaaaaacggtgaaatcattgat
aaatttgaagcattcattgatcccggacacccgctttctgcaacgacgattaatttaaca
ggaattacggatgacatggtgaaaggttcagacccaattgatgttgtgcttcaacgattc
aaggaatggagcgccgacgatattttagtggcccacaatgcctcttttgatatgggattt
atcaataccgcttatgaaaaagtaggaattccaaaagcagaaaatgcggtagtagataca
ttggagctagctcgttttctttatccgcactttaaaaatcatcgcttaaatacattaacg
aaaaagttcaatattattttagaacaacatcaccgagcagtttttgatgccgaagctacg
gcatatctagcttggaaattaattaaagatgccaaagaaatgcacgacatcgattaccat
gattcgttaaatgattatatgggagaaggagatgcatataaacgcgctagacctttccat
gctactatctatgctcaaacagctgttggtttaaaaaatctatttaaattaattacgatg
tctaatattaactatttttatcgtgttccacgtatcccacgttctcaactgaaaaaactt
cgcgaaggtttaattattggaacagcttgtagccaaggagaattgtttgaagcaatgatg
caaaaagggatgctagctgccgaaaaagttgcagagttctatgactttattgaaattcaa
ccgaaaccagtttatgcgccattaatcgagcgagaacttgttcgggatgaaaaagcatta
gaagaaattttaaaaaatatcgttcgtgtcggtgaaaaaaccgggaaaccagtagttgca
acagggaatgtacattacaaagacccagtggacaaaatttaccgtaaaattttgattcat
tcccaaggtggagctaacccacttaatcgtgcagaactaccggatgttcatttccgttct
accgatgaaatgctaaaagagtttgcttttcttggagaagagaaagcaaaagaagtggtt
gtcaccaattctaatttagtagtcgactggatggaagagctaaaaccgattaaagatgaa
ctttatacaccaaaaattgatggtgcagaagatgaagttcgtaatatgagttataatatg
gcacaccagttatacggtgagaaattaccagaaattgtcgaggcgagacttgaaaaagaa
ttgaaaagtattatcggccatggatttgcggttatttacttaatctcgcataaattagtt
aaaaaatcgcttgttgatggttatctagttggatcacgtggatcggttggttcttccttt
gttgccacaatgacagaaataacggaagtaaatccacttccgccacattatctctgtccc
aattgtcaagactcggagttctttgacgatggttcaattggttctggttttgacttacca
gataaagactgtcctcattgcggaacagcctatcaaaaagaaggacaagacattcctttt
gaaacattcttaggatttaaaggggataaggtacccgatattgacttaaacttttctggg
gattatcaaccagttgcccacgcttatacaaaagaaatatttggagaagattatgttttt
cgcgctggaacaattggtacagtagcggaaaaaaccgcatttggttatgttcgtaattat
gaaagagatatgaatatgaccattcgtggggcggaaattgatcgtcttgtagctggttgt
actggcgttaagcggacaactgggcaacatccaggaggaattattgttattcccaattat
atggacgtatacgatttcacacctgtacaatttccggcggatgcgaccgattcagagtgg
aaaacaactcattttgattttcactctatccatgataatgtgcttaaactcgatatactt
ggacacgatgatccgacagctatccggatgttacaggatttaagcggtatcgatccaaaa
acaattccaaccgatgatcccgatgtgatgaaattatttggttccactgaatcacttggt
gtaaaaccagcagatattgattctaaaacagggacacttggtattcctgagtttggaact
cgtttcgtacggcaaatgctcgaacaaaccaaaccaactactttttctgagttagttcag
atttctggtttatctcatggtaccgatgtttggcttgggaatgctgaagaactaattaaa
aataaaacatgtgagcttccagatgtaattggttgtcgtgatgatattatggttttcctt
atttatcaaggtctagaaagctctttagccttcaaaattatggaatccgtccggaaaggg
aaagggttaacagaggaaatggaagaagcgatgatggcaaacaatgttccactttggtat
attgaatcttgtaaaaaaattaagtacatgttcccgaaagcccatgcagcagcgtatgtt
ctcatggcagtccgaatcgcttactttaaagtgcattatccgctctacttctatgctact
tatttcactgttcgtgcagatgattttgatttgacttcgatggtaaatggaaaagaagca
gtaaaagcaacgatgaaagaagtgaatgataaaggaatggaagcttctacgaaagaaaag
aatctattaaccgttctagaaattgcgaatgaaatgcttgctcgcggtttccatttccaa
aaagtagatttatataagtcttctgctgatgaatttattattgatggagactcacttatc
ccaccatttaatgcgattccaagtcttggaaccaacgtagcgaaacaaattgtagcagct
cgtgaaaatggtgaattcttgtccaaagaagacttacagcaacgaggaaaagtgtctaaa
acaattattcaatacatggatgaccaaggatgcttagaaggattacccgatcaaaaccaa
ctgtcactcttctaa
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integrated database retrieval system
