Listeria ivanovii subsp. londoniensis WSLC 30151: JL53_07775
Help
Entry
JL53_07775 CDS
T03402
Name
(GenBank) ribonuclease
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
lio
Listeria ivanovii subsp. londoniensis WSLC 30151
Pathway
lio03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lio00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JL53_07775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lio03019
]
JL53_07775
Messenger RNA biogenesis [BR:
lio03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
JL53_07775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
HTH_6
FUT8_N_cat
Motif
Other DBs
NCBI-ProteinID:
AIS62624
LinkDB
All DBs
Position
1580181..1581743
Genome browser
AA seq
520 aa
AA seq
DB search
MTIAITIISSLLFLIVGLVVGSLIFKSSTEKKLAAARGTAELIVEDAKKEAETTKKEALL
EAKEENHRLRTEIENELRGRRTETQKAENRLLQREENLDRKDTSLSKREATLERKEESIS
KRQQQIEEKESKLAEMIQAEQTELERISALSKEEAKSIILNQVEDELTHDTAIMVKESEN
RAKEESDKKAKNILSLAIQRCAADHVAETTVSVVTLPNDEMKGRIIGREGRNIRTLETLT
GIDLIIDDTPEAVILSGFDPIRREIARIALEKLVQDGRIHPARIEEMVDKARKEVDEHIR
EVGEQATFEVGIHSIHPDLIKILGRLRYRTSYGQNVLNHSLEVSKLAGILAGELGEDVTL
AKRAGLLHDIGKAIDHEIEGSHVEIGVELATKYKENDVVINSIASHHGDTEATSVIAVLV
AAADALSAARPGARSETLENYIRRLEKLEEISESYDGVEKSYAIQAGREVRIIVEPDAID
DLASYRLARDIRKRIEEELDYPGHIKVTVIRETRAVEYAK
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgacaatcgcaatcacgatcatctccagtttgcttttcttaatcgtcggtctagttgtt
ggttctctaatttttaaatctagtacagagaaaaaactggctgctgcaagggggactgcg
gaattaattgtagaagatgcaaagaaagaagcagaaactacaaaaaaagaagcattgctt
gaagcgaaggaagagaatcataggttacgtactgaaatcgaaaatgaacttcgtgggcga
agaacagagacacaaaaagcagaaaatcgcttattgcaaagggaggaaaacctcgaccgt
aaagatacttctttaagtaaacgagaagctacacttgaaagaaaagaggagagtatcagt
aaacgtcaacaacaaattgaagagaaagaaagcaaactagctgagatgattcaagcggag
cagacagaacttgaaagaatttctgcactgagcaaagaagaagcgaaatcaatcatcctt
aaccaggtagaagatgaattaacacatgatacagcaatcatggtgaaagaatcggaaaac
cgggcgaaggaagagtcggataaaaaagcaaagaatattctctcactagctatccagcgt
tgtgcagctgatcatgtggcagaaacaacggtatctgttgttaccttaccaaatgatgag
atgaaaggacggattatcggacgtgaaggccgtaatatccgcacgctagaaacgctaaca
ggaatcgatttgataattgatgatacaccggaagcagtaatactttccggatttgatcca
attcgacgagaaatcgctagaatcgccttagaaaaacttgttcaagatggaagaatccat
ccagctcgcattgaagaaatggtggataaagcccgtaaagaggtggacgaacacattcgc
gaagttggtgaacaagcaacatttgaagtgggaattcattccattcatcctgatttaata
aaaattcttggccgcttgcgttaccgtactagttacggacaaaacgttcttaaccactcg
ctcgaagtttcgaaacttgctggaattttagcaggggagctcggggaagatgtgacgctt
gctaaacgggccggactacttcatgatattggtaaagcaattgaccatgaaattgaagga
agtcatgtagaaattggcgtggaacttgcaactaaatacaaagaaaatgatgtagtaatc
aacagtattgcttctcatcatggagatacagaggctacttctgttatcgctgtattggtg
gctgcagcagatgcgctttctgccgcaagaccaggagctcgtagtgaaacgctagaaaac
tatattcgtcgtttagagaaactagaagaaatttctgagtcttacgatggtgtagaaaaa
tcttatgctattcaagcaggacgtgaagtacgtatcattgttgagccagatgctatcgat
gatcttgcttcttaccgacttgctcgcgacataagaaaacgaattgaagaggaattagat
tatccgggccatattaaagtgaccgtcattcgtgaaacaagagcagtagaatatgctaaa
taa
DBGET
integrated database retrieval system
