Listeria ivanovii subsp. londoniensis WSLC 30151: JL53_08710
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Entry
JL53_08710 CDS
T03402
Symbol
dnaE
Name
(GenBank) DNA polymerase III DnaE
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lio
Listeria ivanovii subsp. londoniensis WSLC 30151
Pathway
lio03030
DNA replication
lio03430
Mismatch repair
lio03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lio00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JL53_08710 (dnaE)
03430 Mismatch repair
JL53_08710 (dnaE)
03440 Homologous recombination
JL53_08710 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lio03032
]
JL53_08710 (dnaE)
03400 DNA repair and recombination proteins [BR:
lio03400
]
JL53_08710 (dnaE)
Enzymes [BR:
lio01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JL53_08710 (dnaE)
DNA replication proteins [BR:
lio03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JL53_08710 (dnaE)
DNA repair and recombination proteins [BR:
lio03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JL53_08710 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
POT1
DUF655
Complex1_51K
Motif
Other DBs
NCBI-ProteinID:
AIS62805
LinkDB
All DBs
Position
complement(1781257..1784583)
Genome browser
AA seq
1108 aa
AA seq
DB search
MGFVHLQVASAYDLLSSTASIDSLVAKAKEYHYPALAITDKNVLYGAVEFYQKCLAADIK
PIIGMTVTIQGYLNPINSYELILIAETTAGYHELLKIASAIQTREEGQELPQSWLRAYSS
NLIAISPGAKGEVERLLMEENQDGALEAYQNLVTIFGENSVYLSLQKENPRLFAKIQTFC
AEENIRAVATKDVQYIEPKDAQAKEVLTAIRDNRTVDWTTLPLAGPNYFTSQEEMEREWQ
NDFEKTACEETGKLADRCQVKIALDQHLLPRFPLEAKQKASEFLRQTAYAGLEERGLMAP
EYQERLDYELKVITEMGFADYFLIVWDVIRYSREVGILTGPGRGSAAGSLVSFVLRITDV
DPIKYNLLFERFLNPERITMPDIDLDFPDNRRDEVISYVVSKYGEAHVAQIGTFGTLAAK
AAIRDTARSFGLNSVLLSEWSKLIPSQLGITLHKAIQENPRLENHIKSSKVNEMIWEVAC
QLEGLPRHISTHAAGIVISDKPLVEQVALQLGSGDARLTQFAMGELEKIGLLKMDFLGLR
NLSLLDRVLKSVNYTREKPLTLADISLEDEKTLKLFQTGDTTGVFQFESDGIRRVLRKLK
PTSFEDIVAVDALYRPGPMEQIDTFIARKHGKEAIQYPHPDLAPILEVTYGVIVYQEQII
QVANQMAGFSLGEADLLRRAVSKKKADVLQEERIHFVEGARSKGYSESSANQVYDMIVQF
ANYGFNRSHAAAYSKIAFQLAYLKANYPAAFMSSLLSSVFGNDDKIAQYITEAKNYGIHM
LAPSINHSNYYFQMESETSIRYSFRVIRKVPTKFVLEIINERKKAPFQDFFDFCERMPHK
MLSETVLEALVLSGCFDEFGEDRATILATIDAVLQYISLLGEDSKGMNLFAEDDDFLKKM
KPRYRKTAPISIDEKLEKEKLYTGQYVSAHPVSYYQTKLQNLTITRLANISSGKMYQVAV
YIHEVKSIRTKKGETMCFMTISDDTKELSAVMFPESYRKYASLAQKGEILFLHVKADKRN
GELQLIVNQAEDLKKVKAPARLFIKLTEPTQMEQIRPILVQFKGKSKVIIHHALTKQTTE
LKNIQVSPSNELQEALVELLGKENVVFK
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
gtgggatttgttcacttacaagttgcgagcgcatatgatttactttcaagtactgcatca
attgattcgcttgtcgctaaagcaaaagaataccattatccagccttggcaattacggat
aaaaatgtgctttacggtgcagttgagttttaccaaaaatgtttagcggcagatataaaa
ccaattattgggatgacagtaacaatacaaggttatttaaatccaattaattcctatgag
ttgatattaattgcggaaacgactgctggatatcacgagttacttaaaatcgctagtgcc
attcaaacgcgtgaagaaggacaagaacttccgcaaagttggctacgagcttatagtagt
aatctcatcgcgatttcgccaggtgccaaaggggaagtggagcggctacttatggaagaa
aatcaggacggggcgttagaagcctaccaaaatttagtcactatttttggagagaattct
gtttatttgtcgttacaaaaagaaaaccctcgccttttcgcaaaaatccaaacgttttgt
gcggaagaaaacattcgtgcagtagcaacgaaggatgtacaatatattgaaccaaaagat
gcgcaggcaaaagaagttttgacggccattcgagataatcgtacggttgattggacaacg
ctaccacttgcaggtccgaattactttacttcgcaggaagaaatggagcgagagtggcaa
aacgattttgaaaaaacagcttgtgaggaaactggcaaattagcagatcgttgccaagtg
aaaatcgctcttgatcaacatttattgccacgtttccctttggaagctaagcaaaaggcg
tcggagtttttacgacaaacggcctatgctggattagaagagcgaggattaatggcacca
gaatatcaagaacgtttggattatgagttaaaagtaatcacagaaatgggatttgcagat
tattttcttatcgtttgggatgttattcgttattctagagaggtcggaattttaacaggc
cctggtcgtggctcggcagcgggatcgttagtttcttttgtgttaagaattaccgatgtt
gatccgattaaatataacttgctatttgagcgttttttaaatccagagcgaatcaccatg
ccagatattgacttggattttccagataatcgtcgtgatgaagtaatttcttatgttgta
tcaaaatacggggaagcacatgtggcacaaattggtacatttggtacgcttgcagcaaaa
gcagcgattcgtgatacggcaaggagttttggtctgaattccgtgcttttatctgaatgg
tctaaacttatcccaagccaattagggattactttacacaaagcgattcaagaaaatccg
cggctagaaaaccatataaaaagttcgaaagtaaatgaaatgatatgggaagtagcctgt
cagctagaagggttaccgcgccatatttccacccatgcagccggaattgtcattagtgat
aaaccgcttgttgaacaagtcgctctgcaattaggtagtggcgatgcacgcttaactcag
tttgccatgggagaattagaaaaaatcggcttacttaaaatggactttcttggacttaga
aatttaagtttacttgatcgtgtgttaaagtcggtcaactatacccgagaaaagccgtta
actttggcagatatttcactagaagatgaaaaaacgttaaaattattccaaactggggat
accacaggtgtttttcagtttgaatctgatggaattcgtcgtgtacttcgaaagttaaaa
ccaacctcttttgaagatattgttgcagtagatgcgctttatcgtccaggcccaatggag
caaattgatacatttattgctagaaagcatgggaaagaagcgatacaatacccgcatcct
gatttggcgccgattttagaagtgacatatggcgttatcgtttatcaagaacaaattatt
caagttgctaaccaaatggctggattttcacttggcgaggcagatttattacgtcgtgca
gtaagtaagaaaaaagcagatgtgctacaggaagaacgtattcattttgtggaaggggcg
agaagtaaaggttattctgaaagtagcgccaatcaagtctatgatatgattgtgcaattt
gcaaattatggatttaaccggagtcatgccgccgcatattccaaaattgcctttcaatta
gcttaccttaaagcaaactacccagcagcgtttatgtcttccttactaagttctgttttc
ggaaatgacgataagattgcccaatatattaccgaagcaaaaaattatggtattcatatg
ttagcgccaagtattaatcatagtaattattatttccaaatggaaagcgaaacatctatc
cgctatagttttcgtgttattcggaaagtaccaaccaaattcgttctcgaaattatcaac
gaacgaaaaaaagcgccttttcaagacttctttgatttttgtgaaagaatgccacataaa
atgctgtcagaaacggtattagaagcgttagttttatccggatgttttgatgagttcgga
gaagaccgagcaactattttagcaacgattgatgcagtactgcaatacatttctcttctg
ggtgaagattctaaagggatgaatctttttgcagaagacgatgatttcttgaagaaaatg
aaaccacgttaccggaaaactgcgcccatttcgatagatgaaaaattagaaaaggaaaaa
ctatatacaggtcaatacgtgtctgcgcatccggtatcatactatcaaacaaaattacaa
aatttgactattactagacttgcgaatattagttccggaaaaatgtatcaagtagctgtt
tatatccatgaagtaaaatctattaggaccaaaaaaggcgaaacaatgtgttttatgact
atcagtgatgatacgaaagaattaagcgctgtgatgtttccagaaagctatcgcaagtac
gcttcgcttgctcaaaaaggagaaattcttttcctgcatgtcaaagcagacaaaagaaac
ggagaacttcaactaattgtcaaccaagcagaagatttaaaaaaagtgaaagctcctgca
aggctatttatcaaattaacagaaccaacgcaaatggaacaaataagacctattttggta
caatttaaagggaagtcaaaggtcattatccatcatgccctgactaagcaaacaaccgaa
ttaaaaaatattcaagtttcgccttcaaatgaattacaagaggcgctagtagagcttctt
gggaaagagaatgttgtgtttaagtaa
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