Listeria ivanovii subsp. londoniensis WSLC 30151: JL53_09810
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Entry
JL53_09810 CDS
T03402
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lio
Listeria ivanovii subsp. londoniensis WSLC 30151
Pathway
lio03420
Nucleotide excision repair
lio03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lio00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JL53_09810
03430 Mismatch repair
JL53_09810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lio03400
]
JL53_09810
Enzymes [BR:
lio01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JL53_09810
DNA repair and recombination proteins [BR:
lio03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JL53_09810
MMR (mismatch excision repair)
Other MMR factors
JL53_09810
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
HHH_3
ResIII
AAA_22
DUF8604
Motif
Other DBs
NCBI-ProteinID:
AIS62990
LinkDB
All DBs
Position
complement(2004939..2007140)
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AA seq
733 aa
AA seq
DB search
MQLNAKELVDGLNPEQKRAVESTEGPLLIMAGAGSGKTRVLTHRIAYLVRERGVNPYNIL
AITFTNKAAREMKSRIGNLMGGEAESIWISTFHSMCVRILRRDIDRIGYERNFTILDGSD
QLSVIKGILKEKNVDPKKFEPRGILASISNAKNELITASEYVKEASGFYDKMVGEVYEKY
EKKLKKNQALDFDDLIMVTIQLFERVPDVLEYYQRKFQYIHVDEYQDTNHAQYLLVKLLA
SRFKNLCVVGDSDQSIYGWRGADISNIMSFEKDYPNAKTILLEENYRSTKRILEAANRVI
ENNGNRKPKNLWTSNAEGKKIFYHKALTEKEEAAYVVMKIQEEVNNSNRPLSDFAILYRT
NAQSRVMEEYFMKSNMAYTMVGGTKFYDRKEIKDILAYLRLISNNEDDISLTRIINVPKR
GVGPGTLEKLNNVAAAYDLSLFEVLNRIELAGISAKISKDLVAFHDLVRGFTQMQDFLSV
TELVEEILEKTGYRAMLKNERTIEAQTRLENIDEFLSVTQNFEKENDDKSLLAFLTDLAL
VADVDKLEEDNEEQNGAVTLMTLHSAKGLEFPVVFLVGMEEGIFPHSRAIYEEDEMEEER
RLAYVGITRAEEELFLTSAYSRMLYGRPSSNQESRFIGEIPRDLLELANENKLKAEKPYA
KTRMPQKVTTAYKSSGAETLGWTVGDKASHKKWGVGTVVSVKGEGSGMELDIAFPSPTGV
KRLLAEFAPIEKV
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgcaattgaatgcaaaagaattggtagacggattaaaccccgaacaaaaacgagcagta
gaaagtacagaaggacctttactaattatggccggcgccggtagtgggaaaacacgtgtt
ttaacgcatcggatagcctatttagtgagggaacgtggcgtgaacccgtataatatttta
gcgattacgtttacgaataaagccgctcgggaaatgaaatcacggattggtaatttgatg
ggcggagaagcagaatctatttggatttccacctttcactcgatgtgtgtccgtatttta
cgccgcgatattgaccgaattggttatgaacgaaattttactatattagatggtagtgac
cagttgtcagtgattaaaggcattttgaaagaaaaaaatgtcgatccgaaaaagtttgaa
ccacgaggtatccttgcttctatcagtaacgccaaaaacgaactgattaccgcaagtgaa
tatgtgaaggaagctagtggcttttatgacaaaatggtcggagaagtgtatgaaaaatac
gaaaagaaattaaagaaaaatcaagcactcgattttgatgatttaatcatggtgaccatt
cagttatttgaacgtgttccggatgttttggaatattatcaacgcaaattccaatatatt
catgtggatgagtaccaagatacgaaccatgcccaatatctactcgtgaaattacttgct
tctagatttaagaatttatgtgttgtaggtgattcagatcaatctatttatggttggcgc
ggggcggatattagtaatatcatgtcttttgaaaaagattatcctaatgcgaaaacaatt
ttattagaagaaaattatcgttcaaccaagcggattttagaagcagcaaatcgagtaatt
gaaaataatggtaatcgtaaaccaaaaaatctttggactagtaatgcagaagggaaaaag
attttttaccataaagcattaaccgaaaaagaagaagcggcttatgttgtgatgaaaatc
caagaggaagtaaacaactcaaatcgtccgttatctgactttgcgattctttacagaacc
aatgcacaatcccgcgtcatggaagaatatttcatgaagtcgaatatggcatatacgatg
gttggcggaacaaaattctatgacagaaaagaaattaaagatattttagcttatttgcga
cttattagtaataatgaagatgatattagtttgactcgaattattaatgttccaaaacgt
ggcgtcggacctgggactcttgaaaagctgaataatgttgctgcggcctatgatttaagc
ttgtttgaagtgcttaatcgtattgagctagcaggtatttctgccaaaataagcaaagat
cttgtagcgtttcatgatttggttcgtggctttactcagatgcaagacttcctatcggta
acggaactcgtagaagaaattctcgaaaaaaccggttatcgtgcaatgctaaaaaacgaa
cgcactattgaagcgcaaactagattagaaaacattgatgagtttttatctgttacacaa
aactttgaaaaagaaaatgatgataagtcattgcttgctttcttaacagatttagcactt
gtagcagatgtagacaaattagaagaagacaacgaagaacaaaacggcgcagtgacacta
atgactctccactcagccaaaggattagaattcccggttgtctttttagtaggaatggaa
gaagggattttccctcattcaagagctatttatgaagaagatgaaatggaagaagaacgc
cgcttagcttatgtaggaattactcgagcagaagaagagcttttcttaactagtgcttat
tcgagaatgctttacgggcggccatcctctaatcaagagtctcgtttcattggcgaaata
cctcgtgacttattagaattagcaaatgaaaataaattaaaagcagaaaaaccatatgct
aaaacgcgcatgccacaaaaagtaacgaccgcttataaatcaagtggtgctgagacactc
ggctggactgtaggcgacaaagctagtcataaaaaatggggtgtaggaacagttgttagt
gtcaaaggagaaggtagtggaatggagctagatatcgcattcccaagcccaactggcgtc
aaacgattactcgcagaatttgccccgattgaaaaagtataa
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