Listeria ivanovii subsp. londoniensis WSLC 30151: JL53_12490
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Entry
JL53_12490 CDS
T03402
Name
(GenBank) ATP-dependent helicase
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
lio
Listeria ivanovii subsp. londoniensis WSLC 30151
Brite
KEGG Orthology (KO) [BR:
lio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lio03400
]
JL53_12490
Enzymes [BR:
lio01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JL53_12490
DNA repair and recombination proteins [BR:
lio03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
JL53_12490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_12
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
AIS63487
UniProt:
A0ABS1G6H3
LinkDB
All DBs
Position
complement(2548519..2552229)
Genome browser
AA seq
1236 aa
AA seq
DB search
MSLNIPDKPSNSTWTDDQWKAIQADGKNILVAAAAGSGKTAVLVTRIIEKLIDETVKWNV
DELLIVTFTNASAAEMKFRIGKALEEALVQNPDSAHLKKQVALLNYASISTLHSFCLEII
RKHYFEADIDPNFRLIEPIESSMIRDEVLEDLLEEAYGIKDNDSFFHLVDSFTGDRTDTE
LHILISKLYDFSRANPEPDIWLEKMVDLYETNNITSITELPYFPIIKEAIELRIHQTKND
LLTAIDYASDTDGPAPYLDTLEGDLAQINMLFQMDWNSWEDVKISIESVDFKRLPTLKNK
SDYDEEYVEQTKKFRDAAKKEIKNVLIEWFSRNEVNYLADLEKMKPNIKALSELVKKFAQ
NFFEEKQKRGVLDFNDLEHLALKILLKDGTPSEVAKSYQKQFKEVLIDEYQDTNMVQEII
LMLVTTMNGTKGNLFMVGDVKQSIYRFRLAEPTLFMTKYQAYQQDGTSGGIRIDLSRNFR
SRKEVLDVTNFIFHQLMDNKVAEIDYDNAAELTLGAHFPESKDMATELLLIDMKTEEKET
EDDALSPQELQKNQVEARAIALKVREMIDNKFPIYDKKMQQNRPIEYRDIVILARAMTSA
PDIEEAMKLQNIPFYANNNSGYFETTEVATMIALLKVIDNPYQDIPLAAVLRSPIIGLTE
EELGQIRLAKKKGYFFDALRAFKDNVISEAADKISEFIKQLNNWRELSIRENLTSLIWQI
YQETNFYEFVGGLPGGKQRQANLRALYDRANQYEKTSFRGLFRFVRFVERLEVRGDDLGT
AKTLSEKEDVVRMMTIHASKGLEFPVVIVSGLSRKFNMRDIYSKTLLDKDYGFASAYRDI
EKMIVYPTIMQQAMKQKKMREMIAEEMRVLYVALTRAEEKLILTATVPDFEKTSKQWLQV
AKEKETILPAAIRARAKCYLDWIGHALIRHISFKELLCEEGIQPLPTDMSLQIEIKTKEM
LLSSEITESKQDNWLEKVRDHQPVPVQSAYKDEIERFMNYQYKDEVATEIRAKQSVTELK
RQFTLQDSWSDTTLLKEFQKVSLDRPKFLQQNKLSATEVGTAMHTLMQAVSLESKPSVGE
VKQLLQKMREKDILTEAQVKAINIEQILAFFESELGEKVLLEKDHVKREVPFSYLLPVAK
LYKQANIDEHVLIQGVVDSMIEQEDSIILIDYKTDKITGRYADWGEAEKVMKNRYQIQIK
LYAEAIQAISGKRVSEAYLYFFDGQHMCRIKTEEGF
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atgagtctaaatatacctgataaacccagtaactcaacatggacagatgaccagtggaaa
gctattcaagcagatggaaaaaacattctagtagctgctgctgcgggttctgggaaaaca
gccgttcttgttactagaattattgaaaaattgattgatgaaacagttaaatggaatgta
gatgaattactaatagttacatttacaaatgcatcagcagcagagatgaaatttagaatc
ggtaaagctttagaggaggctcttgtgcaaaatccggattctgcacatttgaaaaaacaa
gtagcactgctaaattatgcttctatttcaactttgcattcattttgcctagaaattatt
cggaaacattattttgaagcagacattgatcctaacttccgtttaattgagccaattgaa
agtagtatgattagagatgaagtactagaagaccttttagaagaagcttatggtattaaa
gataatgattcgttctttcatttggtagattccttcacaggggacagaacagatactgaa
ttacatattctaatatcaaagctatatgatttttcaagagctaatcctgaaccagatatt
tggttagaaaaaatggtggatttatatgaaacaaataatattacatctatcaccgaacta
ccttattttccgattattaaagaagctattgagctccgaatccatcaaactaaaaatgat
ttattaactgctatagattatgcaagtgacactgatggaccggcaccataccttgataca
ttagaaggagatttggctcaaatcaatatgctattccaaatggattggaatagttgggaa
gatgtaaaaataagtatcgaaagtgttgattttaagaggttacccactcttaaaaataaa
agtgattatgatgaggagtatgttgaacagacgaaaaagtttcgggatgcagcaaaaaaa
gaaatcaaaaatgttttaatagagtggttttccagaaatgaagttaattatttagcagat
ttagaaaaaatgaaaccaaatattaaagctttaagtgaattggtgaaaaaatttgcacaa
aacttttttgaggaaaaacagaaaagaggagtcttagattttaatgatttagagcacttg
gctttaaaaatattactaaaagatggcactccgtctgaagttgcgaagagctatcagaag
caatttaaagaagtgttaattgatgaatatcaagatacaaacatggtacaagagataatt
ttaatgctagttactacaatgaatggaacaaaaggaaacttatttatggttggtgatgta
aagcaatctatttatcgtttccgtttagctgaacccactttatttatgacgaaatatcaa
gcatatcaacaagatggaacaagtggaggtatacggatagacttgtcacgtaatttcaga
agtagaaaagaagtgctggatgttacaaattttattttccatcaattaatggacaataaa
gtggcagaaattgattatgataatgcggctgaattaacattaggagcccattttcctgag
tcaaaagatatggcaacagaacttttattaattgacatgaaaacagaagaaaaggaaact
gaagatgatgcgctatctccacaagaacttcaaaaaaaccaagtagaagccagagctatt
gcgttgaaagttagagaaatgattgataataagtttccaatctatgataaaaaaatgcaa
cagaatagaccaatagagtaccgagatattgtcattttagcacgggcaatgacgagcgca
cctgatattgaagaggcaatgaaacttcaaaatatcccgttttatgccaataataattct
ggttattttgaaacaactgaagtggctacaatgattgcacttttgaaagtaattgataat
ccatatcaagatattccgttagctgctgttttaaggtctccaattatcggcttaacagaa
gaagaattaggacaaattcggttggcgaagaaaaaaggctatttctttgatgcgttgcga
gcttttaaagacaatgttatttcagaagcagcagataaaattagtgagtttataaaacaa
ttaaacaattggcgtgagctatctattcgagagaatttaacttcattaatttggcaaatc
tatcaagaaactaacttttatgaatttgtcggtggtttgccaggtgggaaacagcgtcaa
gcaaatttgcgagccttatacgacagagctaatcagtatgaaaaaacttctttcagagga
ctatttcgatttgtccgattcgttgagcgtttagaagttcggggggatgatcttggaact
gctaaaactctaagtgaaaaagaagatgttgttcgtatgatgacaattcatgcgagtaaa
ggattagaatttccagtggtaatagtatccggattaagtaggaagtttaatatgcgtgat
atttatagtaaaacattattagataaagactatggttttgcatctgcttacagagatatc
gaaaaaatgattgtatacccaactattatgcaacaggcaatgaaacaaaaaaaaatgcgc
gaaatgatagccgaagaaatgcgtgtcctctatgtagcgctcactcgggcagaagaaaaa
ttaattttaactgctaccgttcctgattttgaaaagacgagtaaacaatggctacaagta
gcaaaagaaaaagaaaccattttaccagcagccataagagcaagggcaaagtgttatttg
gattggattggacatgcgctaattcgtcatattagttttaaagaattactttgcgaagag
ggcattcaaccacttccaactgatatgtcgcttcaaatagaaattaaaacaaaagaaatg
cttttatcaagtgaaataaccgaaagtaaacaagacaattggttggaaaaggtaagagat
catcaaccagtgcctgttcaaagcgcgtataaggatgaaattgagcgatttatgaactat
cagtataaagatgaagtagcaacagaaattcgcgctaaacagtctgtaacggaattgaaa
cgacaattcaccttacaagatagttggagtgacacgacgcttttaaaagaatttcaaaaa
gtatcgctggatagacccaaattcttgcaacaaaacaaattatctgcaactgaagtaggt
acagccatgcatacattaatgcaggcggtttctctagaaagtaaacctagtgtaggcgaa
gtgaaacaacttttacaaaagatgagagaaaaagacattttgacagaagcgcaagtcaag
gctattaatatagagcaaattcttgctttttttgaatcagaactaggcgaaaaagtactt
ctggaaaaggatcatgtgaagcgtgaagtaccatttagttatttacttcctgtagctaaa
ctttacaaacaggctaatatagatgaacatgtactgattcaaggtgttgtcgatagtatg
attgaacaagaagattctatcattttgatcgattataaaacggataaaataactggaaga
tatgctgactggggcgaagcagaaaaagtaatgaaaaatcgctatcaaatacaaatcaag
ctttatgcggaagcaattcaggcaataagtggaaaacgagtatccgaagcatacttatac
tttttcgatggacagcatatgtgccgaataaaaacagaggaaggtttttaa
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