Listeria ivanovii subsp. londoniensis WSLC 30151: JL53_13170
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Entry
JL53_13170 CDS
T03402
Name
(GenBank) RNA polymerase sigma54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
lio
Listeria ivanovii subsp. londoniensis WSLC 30151
Pathway
lio02020
Two-component system
lio02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
lio00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JL53_13170
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
JL53_13170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lio03021
]
JL53_13170
Transcription machinery [BR:
lio03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JL53_13170
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Sigma70_r4
HTH_3
HTH_23
HTH_IclR
HTH_17
MarR_2
HTH_10
Sigma70_r4_2
LacI
Fe_dep_repress
HTH_26
HTH_31
HTH_Tnp_ISL3
HTH_20
HTH_Crp_2
DUF8612
HTH_AraC
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AIS63604
LinkDB
All DBs
Position
complement(2678181..2679524)
Genome browser
AA seq
447 aa
AA seq
DB search
MRLESNFVQKQQQKQSLKLNMTQQLSQSIAMLQFATADLMAFLEDKALENPLIEVIPGSD
IGTDFTYSSRKSSGSSDDTDWLDQIADNKLTLADALKEQLQLMSVTQTHKIIILYLIESL
SDSGYLQIDLKDVSAALLMDDSSVLEGLEILQSMEPAGVGARDARECILLQIERSPAAPY
IAYDVIQKYFTEFAEKKWKKVATEMDVSLQDIQEVSDYIQTLNPKPGSEFESERVQYVVP
DLILLQNDKELTVTLAKQFLPQVRFQAAYYETMRATKEKDVAQFLREKAGEFDWIKKGIE
QRENTLQRVGEAIVQHQKAYFLDNSAHLQPLTLKEVAEELGIHESTVSRAVNGKYMETST
GVYELKRFFASGLQKKSAENEDLGDVSSTTIKKLVQEFVSKEDKLKPLSDQKIVDMLAEK
EIQVSRRAIAKYRLELNIPSSSKRKRF
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
ttgcgtttagaatctaatttcgtccaaaagcaacaacaaaaacaatcgttgaaattaaac
atgacgcaacaattgtcacagtctattgctatgctacaatttgcaacagctgatttaatg
gcatttttagaagataaagcacttgagaacccattaattgaagtgattccaggctcagat
attggaacggattttacttatagcagccgtaaaagttctggaagttcagatgatacagac
tggctagaccaaattgcagataataagttgactttagctgacgcgctaaaagaacagcta
caattaatgagcgtgacacaaacacacaaaataattattttatatttaatagaaagttta
agcgatagtggttatttacaaattgatttaaaagatgtcagcgctgctcttttgatggat
gattcaagcgtattagaagggcttgaaattttacaaagtatggagccggctggcgttgga
gcaagagatgcgcgcgaatgtatcttactacaaatcgaacgttccccagctgctccttat
atcgcttatgatgttattcaaaagtactttacagaatttgctgagaaaaaatggaagaaa
gttgctacagaaatggatgttagcttacaagatattcaagaagtatctgattatattcaa
actttaaatccaaaaccaggttctgagttcgaatcggaacgcgtgcaatatgtagtgcca
gacttaattctattacaaaacgacaaagaactcactgtcacacttgcgaaacaatttcta
ccacaagttcgtttccaagccgcttactatgaaacgatgcgtgcaaccaaagaaaaagat
gtggctcaatttttacgagaaaaagcgggagaatttgattggattaaaaagggaattgaa
caacgagaaaacactttacagcgcgtgggtgaagcaattgtgcagcatcagaaagcctat
ttcttagataattcagcacatttacagccattaactttgaaagaagtagcagaagaacta
ggcatacatgaatccactgttagtcgtgcagtaaatggcaaatacatggaaacaagtact
ggcgtatacgaattgaagcgcttctttgcatctggattacagaaaaagtctgctgaaaac
gaggatttaggagatgtttccagcacgacaatcaaaaaactcgtgcaagaattcgtatct
aaagaagataaattaaagccactttctgatcaaaaaatagtagatatgttagcagaaaaa
gaaattcaagtttctagaagagctattgctaaatatcgtttggagctaaacatcccatca
tcatctaaaagaaaaagattttaa
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