Leptospira iowaensis: AB3N60_09620
Help
Entry
AB3N60_09620 CDS
T10746
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
liow Leptospira iowaensis
Pathway
liow03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
liow00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AB3N60_09620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
liow03021
]
AB3N60_09620
03400 DNA repair and recombination proteins [BR:
liow03400
]
AB3N60_09620
Enzymes [BR:
liow01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AB3N60_09620
Transcription machinery [BR:
liow03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AB3N60_09620
DNA repair and recombination proteins [BR:
liow03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AB3N60_09620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
DUF4175
RNase_H
Endonuc-dimeris
Motif
Other DBs
NCBI-ProteinID:
XDD44979
LinkDB
All DBs
Position
1:complement(2047327..2048304)
Genome browser
AA seq
325 aa
AA seq
DB search
MSPKNLLKGFKRPKKIEFTTDVNTPNYGKFVAEPFERGIGTTIGNSLRRTLMSSIEGAAI
SAIRIEGVSHEFSYIEGVAEDVTRIILNLKQVRIKYEPEDKEASKVIHLELKGAGYFRAA
DLAVDSSIEIMNPDLHIATLNEDANLIMDLEIQRGRGYVPAEDKKKDIEVLGTIPIDSIF
SPIQKVLFEVSETRVAQRSDYEKLTMEVWTDGSVSPEDAVAQAAKILKDHLTVFINFEEE
IEEEEEELDEADEKLKAALSKHVEELELSVRSTNVLRSLEIDFIGELVKRSEDEMTKSKH
FSEQSLQELKAKLSSMGLSFGMRDF
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
ttgtctccaaagaatttattaaaaggttttaaaagacccaaaaaaatcgaattcactacc
gatgtgaatacaccaaactacggtaagtttgttgcagaacctttcgaaagaggaattggt
acaacgatcggtaactcgcttcgtcgtactcttatgtcttcgattgaaggggcagcgatt
tctgcgattcggattgagggagtttctcatgaattctcttatatcgaaggtgttgcagaa
gacgtaactcgtattattcttaacttaaaacaagttcgaatcaaatacgagccggaagac
aaagaagcaagtaaagtaatccacttggaactcaaaggggcaggatactttcgtgctgct
gacttagctgtagattcttctatcgaaatcatgaaccctgaccttcatattgctaccctc
aatgaggatgccaatttgattatggatttggaaatccaaagaggacgtggttacgttcct
gcggaagacaaaaagaaagacatcgaagtgcttggaacaattccaattgattcaattttt
tctccaatccaaaaggtattgtttgaagtatcagaaactcgtgttgcacaaagatctgac
tatgaaaaacttactatggaagtttggactgatggttctgtgtcccctgaagatgcagta
gcacaagcagcaaaaatattaaaagaccacctcactgttttcatcaattttgaagaagaa
attgaagaagaagaagaagagttggatgaagctgatgaaaaactaaaagcagctttatcg
aaacacgtagaagaattggaactttctgttcgttctactaacgttcttcgcagtttggaa
atcgacttcattggtgagctcgtaaagagatcagaagacgaaatgacgaaatcaaaacat
ttcagcgaacaaagtttacaagagttaaaagcaaaactttcctctatgggactttctttc
ggtatgagagatttttaa
DBGET
integrated database retrieval system
