Leptospira iowaensis: AB3N60_18715
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Entry
AB3N60_18715 CDS
T10746
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
liow Leptospira iowaensis
Pathway
liow03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
liow00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AB3N60_18715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
liow03019
]
AB3N60_18715
03009 Ribosome biogenesis [BR:
liow03009
]
AB3N60_18715
Enzymes [BR:
liow01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AB3N60_18715
Messenger RNA biogenesis [BR:
liow03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AB3N60_18715
Ribosome biogenesis [BR:
liow03009
]
Prokaryotic type
rRNA helicases
AB3N60_18715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
Helicase_RecD
AAA_19
Cas3-like_C_2
Flavi_DEAD
SecA_DEAD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
XDD48371
LinkDB
All DBs
Position
2:209802..211400
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AA seq
532 aa
AA seq
DB search
MTKNDTEVGNDFQSFGLRPEILQGITEAGFESPSPIQKQAIPLVLEGKDLIAQAQTGTGK
TAAYGLPCLNRINVEDGMQVLVLTPTRELALQVSDELFKLGKHLGIKTTTIYGGSSYSKQ
ITQVAKGAQVAVATPGRLLDLLKGKELKNFKPSMVILDEADEMLDMGFMDDIESIFNLLP
TKRQTLLFSATMPEPIKKLASKYQTHPAHVKIAATEKSSKNIEQVYYIIDEAERETAVVR
ILDYESPFKAIIFTKTKKEADDLKATLSFKGYPVEALHGDLNQKQREQVLKSLHDGRVKI
LVATDVAARGLDVKDLSLVINYHLPFDSESYTHRIGRTGRAGKSGKAVTLVTTRESRALL
RLKGTSGTQLTIAALPTKKEVHARREEDFLNKIVETEIHADAEEVLEKLLKLDDKRSVAL
KLLSNMLDKAKISGPEKIGKTPAEWSEMPPGGGSGGGRRRRDDGGGSGSRGGYRGGRSNS
DRSERGERSDRGGERKERGGESRRSSTPSSSKKEGGVFVKAAGKKTQRFRNK
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgactaagaatgacaccgaagttggaaatgacttccaatccttcggattacgtcctgaa
atactacaaggaatcactgaagcaggcttcgaatcaccaagccctatccaaaaacaagcg
attccgctcgtattggaaggaaaagatttaatcgcacaagcgcagaccggtaccggaaaa
actgcagcttacggactcccctgtttgaaccgaatcaatgtagaagatggcatgcaagtg
ctcgtcctcacaccaactcgggaacttgcattgcaagtatcagatgaattgttcaaattg
ggaaaacatttaggaatcaaaaccaccacgatttatggcggtagttcctattctaaacaa
atcactcaagtggcaaaaggtgcccaagttgcagtagcaactcctggcagactccttgac
ctattaaaaggtaaggaacttaaaaatttcaaaccatcaatggtgattttagacgaagca
gatgaaatgcttgatatgggatttatggatgatatcgaatccatctttaacttacttccc
accaaacgccaaacattattattttctgcaacaatgcccgaaccaattaaaaaattggcg
agtaaataccaaacacaccctgctcacgtaaagattgcagcaacagaaaaatcttctaaa
aacatcgaacaagtatattacataatcgatgaagcagaacgtgaaacagctgttgtacgg
attttggattatgaaagcccatttaaggcaatcattttcacaaaaacgaaaaaagaagct
gatgatctgaaagcaacccttagtttcaaaggatacccagttgaagctcttcacggagac
ttaaaccaaaaacaaagagaacaagttttgaaaagcctacatgatggccgagtgaaaatc
cttgtggcaactgacgttgcagcacgtggtcttgacgtaaaagatttgtctcttgtgatc
aactaccacctaccttttgatagcgaaagttatacgcaccgtattggacgtactggccga
gcaggaaaatcgggtaaggctgtaactcttgtaacaacaagagaatcaagagcccttctc
cgactaaaaggaacatctggaactcaacttaccattgcagcacttcccactaaaaaggaa
gtacacgcaagacgagaagaagacttcctgaacaaaattgtcgaaaccgaaatccatgcc
gatgcagaagaagtattggaaaaacttttgaagttagacgacaaacgttctgtcgcttta
aaactgctttccaatatgctcgacaaagctaaaatcagcggccctgaaaaaatcggaaaa
accccagcggaatggagcgaaatgcctccaggtggtggttctggtggaggaagacgtcgt
cgggatgatggtggtggatcaggaagccgcggtggttaccgtggtggaaggtccaacagt
gatcgcagcgaacgtggtgaaagaagtgatcgcggcggagaaagaaaggaacgtggtgga
gaaagccgccgttccagcaccccctcttcttctaaaaaagaaggtggagtgtttgtgaaa
gcggctgggaaaaaaactcagcgttttcgaaacaagtag
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