Lawsonia intracellularis PHE/MN1-00: LI0051
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Entry
LI0051 CDS
T00354
Symbol
uvrD
Name
(GenBank) ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains)
Organism
lip
Lawsonia intracellularis PHE/MN1-00
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
PDDEXK_1
NucS_C
YhcG_C
Cas_Cas4
Motif
Other DBs
NCBI-ProteinID:
CAJ54107
UniProt:
Q1MSB8
LinkDB
All DBs
Position
complement(69095..72304)
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AA seq
1069 aa
AA seq
DB search
MKKMNIQKSSYEEYFPLLRQIRASAGSGKTYELTYSFLSLLNKSINDNNTNSSYNKYEHS
WTSILAITFTNRAAAEMQQRIITRLKQAALNTQPIPGLTSTQAAHWINIFLRNYSELNIC
TIDSLLHTIVHSTALELHLPPDFQPIFSTEEALTPLLDSILKKTQHNERLYIILKEACSD
ILFHTKHNNFMIGSTLREKVLSILPLLINGEQEITSPQEITAHLTIKIQSVKKIATELAS
CIKNEQLSIHSNFKKALEACQIGTQHTIPPKSTMLRKPNLTDCILKSSKNTPSHHTISLY
NTLQSLITYLDTTGVLLKNSQKTIPYVKLAKELYNLLPEFFCKQRIILAELIPSLAQQAV
SGHYGISEIFCKLGTNLQHILIDEFQDTSHEQWAVIQPFVVEALSYGGSLTWVGDVKQAI
YGWRGGDTTLFEKVLSDPELQSIASYVQKESLPINWRSAYHIVNTNNTLFTKLSDHNIVQ
SIFSKILPNEIAPTIKNTILSEQVPLVTQSFADAEQSIAPNKKEGYVYIQRILNDEESDP
DTVVHDRLINIIHDIQTRRSLGDIAILVRSNKRAMQVANWLMEKNIPVVTENSFLLIEHP
IILQFIAILEFLDSPQNDLAFWRIINGGNLVQPLLNIPQQKLDEWICIRNRSQPLYLAFK
ADFPDAWEHWILPFYDDSGLLSAYDAIQESIDRLKIKKRFPKEMSFIRRFLEIIYIASTK
GYDSISNFLEYWKQHGHKEKTPMPENIAAVRIMTIHKSKGLQFPIVIIPWHDFPLKPNDS
LIQTCVDGFNIIVKQSPAMPKEYYSSLLKNVCESLNLLYVAWTRAEEELYALITSTKSKK
ISFAEAINPILDYLSWDNNIYQLGEKTYTSNHTAMLSSNKNSTEIPYIYLETKDESTSSW
RPMHWLPQLRIFRNPVNELGITSKRRGTFIHHCLQYLCISKNPNIDISLAIDYAIKRFPL
PLPSSQYNIIVKDVLSILQWYTSLPKTRYWIQFGLAEQTLLDKNNNIYRVDLLVNNGKEY
SVIEYKTGETSLQHIQQLQKYLDIIKETTSLPVKGYIIYLDLKRIHTIE
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaatgaacatacaaaagtcatcatatgaagaatactttcctcttcttcgtcaa
attcgtgcctcagctggatctgggaaaacatatgaactcacatatagttttcttagtctt
ctaaataaaagtataaatgacaataacacaaactcttcttataacaagtatgaacattca
tggacaagtattcttgccattacctttaccaatagagctgctgcagaaatgcaacagcgt
attataactcgattaaagcaagcagcactcaatactcaaccaataccaggcttaactagt
acacaagcagcacattggattaatatttttctacgcaattatagtgaactcaacatatgt
acaattgatagtttacttcatactattgtgcatagtactgcattagaacttcatctccca
cctgattttcaacctattttttctacagaagaagcactaacaccactattagactctatc
cttaaaaaaacacaacataacgaaagactttatattatactaaaagaagcctgtagtgat
atattatttcatactaaacataacaattttatgattggatctactctaagagaaaaagtt
ctttcaatactacctctacttataaatggtgaacaagaaataacttcacctcaagaaatt
acagcacatcttacaataaaaattcaatcagtaaaaaaaatagcaacagaacttgcatct
tgcatcaaaaacgaacaactttccattcattcaaattttaaaaaagctcttgaagcttgt
cagataggaacacaacatacaattccaccaaaatctacaatgttacgtaaaccaaaccta
actgactgtatactcaaatcttcaaaaaatacccctagtcatcatactatttcactttat
aatacccttcaatcactaattacatatcttgatacaacaggagtattattaaaaaactct
caaaaaactataccttatgttaaattagctaaagaattatataacctactaccagaattt
ttttgtaaacaacgtattatccttgctgaacttattccttcattggcacaacaagcagtc
tcaggacattatggtatatcagaaatattctgtaaacttgggacaaatcttcaacacatt
cttattgatgaatttcaagatacaagccatgaacaatgggctgttattcaaccttttgtt
gttgaagctctttcctatggaggatcattaacatgggttggagatgttaaacaggcaatt
tatggttggagaggtggtgatacaacactctttgaaaaagtcctatccgatccagagcta
caatctatagcatcttatgttcaaaaagagagcttacctataaactggagaagcgcatat
catattgttaatacaaataatactctttttactaaattatctgatcacaatatagttcaa
tctattttctctaagatactccctaatgaaattgcaccaacaataaaaaatactattctc
tcagagcaagtacctctagtaactcagtcttttgcagatgctgaacaatccatagctcca
aacaaaaaagaaggatatgtatatattcagcgtatactaaatgatgaagaaagtgatcct
gacactgttgttcatgatagattaataaatatcattcatgatattcaaacacgtcgctct
ttgggggatattgctattcttgttagatctaataaaagggctatgcaagtagccaactgg
ctgatggaaaaaaacattcctgtagtgacagaaaatagctttttacttatagagcatcca
attatccttcagtttattgctatattagagtttttagattcacctcaaaatgatcttgcc
ttttggagaataataaatggaggaaatcttgttcaacctcttcttaatatcccacaacaa
aaattagatgaatggatatgtattagaaatcgctcacaacccttataccttgctttcaaa
gctgactttccagatgcatgggaacattggattcttcctttttatgacgattctggatta
ctttctgcttatgatgcaatacaagaatctattgaccggcttaaaataaaaaaacgattt
ccaaaagaaatgtcttttattagaagatttcttgaaattatctatatagcaagtacaaaa
ggatatgattctatatcaaattttttagagtactggaaacagcacggtcataaagaaaaa
acaccaatgccagaaaatatagctgccgtaagaatcatgacaatccataaatctaaagga
ctacaatttcctatagtcattattccatggcatgattttcctcttaaacctaacgattca
cttattcaaacatgtgttgatggttttaatattattgtaaaacaatcaccagccatgcca
aaagaatattatagcagtttactaaaaaatgtttgtgaatcattaaacctcttatatgtt
gcatggacaagagctgaagaagaattatatgcactcattacatcaactaagtctaaaaaa
atatcatttgctgaagccattaaccccatactagactatctcagctgggataataatatc
tatcaactaggtgaaaaaacatatacttctaatcatacagcaatgttatcttctaataaa
aacagtacagaaataccatacatatatcttgaaacaaaagatgaaagtacatctagttgg
agacctatgcactggttacctcaattacgtatttttcgtaatccagtgaatgaactaggt
attacgagcaaaagaagaggaacttttatacatcactgtttacaatatttatgcatatca
aaaaatccaaatatagatatctcccttgctatagattatgctataaaacgatttccactc
cctttaccatcctcacaatataatattattgtaaaagacgtgctatctattcttcaatgg
tatacttctctaccaaaaacaaggtattggatacaatttggacttgcagaacaaacactt
cttgataaaaataacaatatttatcgtgttgatcttctggttaataatggtaaagaatat
tctgttattgaatataaaacaggagaaacatccctacagcatatacaacaattacagaaa
tatttggatatcataaaagaaacaacatcattacctgtaaaaggttacattatttattta
gacttaaaacgaatacataccattgaataa
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