Lawsonia intracellularis PHE/MN1-00: LI0168
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Entry
LI0168 CDS
T00354
Name
(GenBank) Superfamily II DNA/RNA helicases, SNF2 family
Organism
lip
Lawsonia intracellularis PHE/MN1-00
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SNF2_assoc
Helicase_C
ResIII
DEAD
HDA2-3
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CAJ54224
UniProt:
Q1MS02
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Position
complement(207522..210743)
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AA seq
1073 aa
AA seq
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MNFREENIARSLIQGFIKGSIPDYIRDVGQSIIQNNGVQKLTIRKEHDIWYIDSIVQEED
FQNYSPQLIIFIEESRVSHTCNCHEAFMGVCKHIASVAIKLHNDLDKSTDLVEEPIKHNI
EWRQSFRNFFSTSLEPEVGRHYLIFRFYPEPTRLIVAFFRGRQNKTGLSSVHQETTLEQI
LRNPDWCEQSPQLLKVAQQIGHFLDYYGHRVEIPEGLVSWFFWAIRHEYYLLWRDTNLPC
TIVSTPLALKLKPSLDDEGLRFYVLLQREGKMPFSLTEEDTEITFHGQMPLWVNWNQSFY
PVQTSLSPTLIKELVANTPIVPQDNISEFLDRVWTRLPSSELYEPEEFLKIMEPIFQPAS
YDPKLFLDEEGSLLTLEVQNTYETIHGEFTLPGPNPDFQTGSYIFEGHTFLIRRDQQEES
ALITQLSEMHFQPRSNKLWFMEPEEAIAFLLDSYPTLVENWRVYGEKALTRYKVRIAQPV
ITAKVESNEKEKWFNLDIDVEYDGQHLPLERIWKAWVRGKRYVQLKDGSYTSLPETWLQK
LSHKLHALGFDPTKPPKHQFKQFEAPVLDTILDELPNSETDSFWNSLRNKIRSFKEITPI
ETPKGLNATLRSYQLQGVSYLNFLSEYGFGGILADEMGLGKTIQTLSFIQHMVNRKYEGP
NLIVVPTSVLPNWEREAEKFVPDLKRLTIYGTRREGMFKKVVNSDLVITTYALLRRDLEE
LEKHYFNTIILDEAQNIKNPNTITAKSVRTIKARMRLCLSGTPIENNLFELWSLFEFLMP
GFLGSQHAFQRGVIKPIRDGDNETLEYLRTRVKPFILRRTKSEVAKDLPPKIENITYCAM
TDEQNELYTALTKKLRSQVLADIETKGIAKSQMSILDALLKLRQICCHPRLLKVDMPGFS
IGSLASGKFEAFKDMIFDIVEGGHKVLVFSQFVQMLQLIKSWLQITDIPFCYLDGTSKDR
LEQVDKFNNTPEIPVFLISLKAGGTGLNLTSADYVIHYDPWWNPAVESQATDRTHRIGQT
RQVFSYKLICQNTVEEKILKLQEMKRGVAEAIIPGQDTWKSLTKEDLEMLFEI
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgaattttcgggaggaaaatatagcccgatctctgatccaaggctttataaaaggttca
atccctgattatattagggatgttggtcaatcaattattcaaaacaatggtgtccaaaaa
cttaccattcgtaaagaacatgatatttggtatatagacagtattgtacaagaagaagat
tttcaaaactattctccacaacttattatttttattgaagaatcacgtgtttctcataca
tgcaactgtcatgaagcatttatgggcgtatgtaaacatattgcttcagtagctattaaa
cttcataatgatcttgataaatcaacagatcttgttgaagaacctataaaacataatatt
gaatggcgtcaaagttttcggaatttcttttctacttctcttgaaccagaagtaggacgt
cattaccttatttttaggttttaccctgaacctacaagacttattgtcgctttcttccgt
ggacgccaaaataagaccggactgtcttctgtccatcaagaaacaacattagaacaaatt
ttacgtaatcctgactggtgtgaacaatctcctcagcttttaaaagtagcccaacaaata
ggacatttcttagactattatggacatagagtcgaaatccctgaaggacttgtttcatgg
tttttctgggctatacgtcatgaatattatcttctttggagagatacaaacctcccttgc
actattgtcagtactcctttagcccttaaacttaaaccaagccttgatgatgaaggacta
cgcttttatgtcttgttgcaacgtgaaggaaagatgcctttttcactcacagaagaagat
acagaaataacgtttcatggacaaatgcccctttgggtaaattggaatcaaagtttctat
cctgttcagacaagtctgtcaccaactcttattaaagaacttgttgctaataccccaatt
gtaccacaagataatatttctgaatttcttgatagagtatggactcgactaccttcatct
gaactatacgaaccagaagaatttctaaaaataatggaacctattttccaaccagcatcc
tatgacccaaaactttttcttgatgaagaaggtagtttactcacgctagaagtacaaaat
acatatgaaacaattcatggcgaatttactcttcctgggccaaatcctgactttcaaaca
ggaagctatatttttgaaggtcacacatttcttattcgaagagatcagcaagaagaatca
gcgcttataacacagctgtctgagatgcactttcaaccacgcagtaacaaattatggttc
atggaaccagaagaagctattgcatttctactagactcatatcccactctagtagaaaac
tggagagtttatggagaaaaagcacttaccagatataaagtaaggatagctcaacctgtt
attactgcaaaagtagaaagtaatgaaaaagaaaaatggtttaatttagatattgatgta
gaatatgatggtcaacatttacccctagaacgtatttggaaagcatgggtgcgaggtaaa
aggtatgtccagttaaaagatggttcatatacaagtttacctgaaacatggctacaaaaa
ctctctcataaacttcatgcacttggctttgatccaactaaacctccaaaacatcaattt
aaacaatttgaagcacctgttcttgatactattcttgatgaacttcctaattcagaaaca
gattcattttggaattcattacgaaataaaattagaagtttcaaagaaattacacctatt
gaaacacctaaaggattaaatgcaacattacgtagttaccaactacaaggcgtatcttac
cttaattttcttagtgaatatggttttggaggtatccttgctgatgaaatgggattagga
aaaacaatacaaactctttcctttattcaacatatggtaaatcgaaagtatgaaggacca
aaccttatagttgttcctacctcagttcttccaaactgggaaagagaagcagaaaaattt
gttccagatttaaaaagattaactatttatggaacacgacgtgaaggcatgttcaaaaaa
gttgtaaattcagatttagttataacaacatatgctctacttagaagagatttagaagag
ttagaaaaacattactttaatactattattcttgatgaagcccaaaatataaaaaatcca
aatacaattacagctaagtctgttaggacaatcaaagcacgtatgcgtctttgcttatca
ggtactcctattgaaaataacttatttgaattatggtcattatttgaattccttatgcct
ggatttcttggttcacaacatgcattccaacgtggagttattaaacctatacgcgatggt
gataatgaaaccttagaatacttacgaactcgcgtaaaaccatttattttacgacggaca
aagtcagaagtagcaaaagatcttccaccaaaaattgaaaatattacatattgtgcaatg
acagatgaacaaaacgagctttatacagcacttactaaaaaacttcgctcacaagtactt
gctgatatagaaactaagggtattgcaaaaagtcaaatgtctatacttgatgcactacta
aaacttcgacagatatgttgtcatccacgcctactcaaagtagatatgccaggcttctct
attggaagtcttgcatcagggaaatttgaagctttcaaagatatgatctttgatattgtt
gaaggtggacacaaagttcttgtgttctcacaatttgtacagatgcttcaattgatcaaa
agctggctacaaataactgatattccattttgttatcttgatggaactagtaaagataga
cttgaacaagtagataaatttaataacactccagaaattcctgtcttccttatctctctt
aaagctggaggaacaggtcttaacttaacctctgcagattacgtcattcattatgatcca
tggtggaaccctgctgttgaaagccaagcaacagatagaacacatcgtattggacagaca
cgacaagtgttttcttataagcttatctgtcaaaatacagtagaagaaaaaatccttaaa
cttcaagaaatgaaacgtggtgttgcagaagcaattattcctggacaagatacttggaaa
tctcttactaaagaagatttagaaatgctatttgaaatctag
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