Lawsonia intracellularis PHE/MN1-00: LI0241
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Entry
LI0241 CDS
T00354
Symbol
uvrB
Name
(GenBank) Helicase subunit of the DNA excision repair complex
KO
K03702
excinuclease ABC subunit B
Organism
lip
Lawsonia intracellularis PHE/MN1-00
Pathway
lip03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LI0241 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lip03400
]
LI0241 (uvrB)
DNA repair and recombination proteins [BR:
lip03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LI0241 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LI0241 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
SWI2_SNF2
AAA_30
Kinesin
AAA_22
UB2H
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
CAJ54297
UniProt:
Q1MRS9
LinkDB
All DBs
Position
300171..302201
Genome browser
AA seq
676 aa
AA seq
DB search
MSNLLFTIKTQYKPQGDQPEAIKQIVSNIQSGVKDQVLLGVTGSGKTFTMANVIAQCNRP
ALILAPNKTLAAQLYNEFKELFPYNAVEYFVSYYDYYQPEAYVPSSDVYIEKDSSINDDI
DKLRHAATHALLTRRDVIIIASVSCIYGLGSPEYYARLIIPVEKGQQINMDEIITRLVDI
QYQRNDMDFHRATFRVRGDVLEIIPAYEHERALRLEFFGNEIEEIREIDPLTGEVLGNVG
KTVIYPASHYVSDRDNLIRAMTDIQKELCERLYDFQATNKLVEAQRLEQKTQLDLEMIQE
FGYCNGIENYSRHLDGRKPGDPPSTLLDYFPKDFLFFIDESHIAIPQVGGMFKGDRSRKQ
TLVDFGFRLPSALDNRPLEFHEFLTRLNQVIYVSATPGPWELDRSQGIITEQIIRPTGLL
DPEIEVRPIKGQIESLLEECYQRVNSHERVLITTLTKRMAEDLTDYLNNMSINTRYLHSD
IDTLERMAIIKSLRTGEFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSTGSLIQTF
GRAARNVSGKVILFADTMTKSMKAAIDETRRRRALQQEWNTKHNITPKTIQKSVVTPFDM
ISANTSSKKGCRKNKHSMDTKELFVITDKTSPEDITKYIKQLEYEMKEAAKELEFEKAAV
LRDRIKVTREQFLLMS
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgtctaacttactttttacaataaaaacacaatataaacctcaaggagatcaaccagaa
gctataaaacaaattgtttctaacatccaatctggagtgaaagatcaagttcttcttgga
gttacaggatcaggaaaaacattcactatggctaatgttattgctcaatgtaaccgtcca
gcacttattcttgcacctaataaaacactagcagcacaactttataatgaatttaaagaa
cttttcccatacaatgccgttgagtactttgtaagctactacgattactatcaaccagaa
gcatatgtaccatcatcagacgtatatattgaaaaagattcatctattaatgatgatatt
gataaacttcgtcatgcagctacacatgccttacttactcgacgagatgttattatcatt
gcatcagtttcctgtatttatggacttggttcaccagaatattatgcacgacttattatt
cctgtggaaaaaggccagcagattaacatggatgaaattattacccgcttagtagatatt
caatatcaacgaaatgatatggactttcatcgtgcaacatttcgtgttcgaggtgacgtt
ctagaaattattcctgcatatgaacatgaacgtgcattacgtttagaattttttggtaat
gaaatagaagaaatacgagaaatagatcctctaacaggagaagttcttggtaatgttgga
aaaacagttatttatcctgcaagtcactatgtatctgatcgagataaccttattcgagca
atgacagatatccaaaaagaactttgtgagcgcttatatgattttcaagctaccaataaa
ctagtagaagctcaacgtcttgaacagaaaactcaacttgatttagaaatgatccaagaa
tttggatattgtaatggaattgaaaattattcccgtcacttggatggtcgtaaaccagga
gatcccccatctactttactagactacttcccaaaagattttcttttctttattgatgaa
tctcatattgctatcccacaagtaggtggaatgtttaaaggtgatcgttctcgtaaacaa
acgcttgtagattttggatttcgtttaccctcagctcttgataacagacctcttgagttt
cacgaatttttaactcgacttaatcaagtcatttatgtttctgccacacctggaccatgg
gaactagatcgctctcaaggcattattacagaacaaatcattagacctacaggactatta
gatcctgaaattgaagtacgtcctattaaaggacaaattgaaagtttacttgaagaatgc
taccaacgagttaattcacatgaaagagtattaataacaacacttacaaaacgtatggca
gaagatttaacggactaccttaacaatatgagtattaatacccgctatcttcattcagat
attgatactttagaacggatggccattataaaatcattgcgcacaggagaatttgatgtc
ctagtgggtattaacttattacgtgaaggtcttgatatcccagaagtatctttagtagct
atcttagatgcagacaaagaaggttttttacgctctacaggttctcttattcaaacgttt
ggaagagctgcacgaaatgtttctggaaaagttatactttttgctgatactatgacaaaa
tctatgaaagcagctatcgacgaaacacgacgacgcagagctctccagcaagaatggaat
acaaaacataatattactcctaagaccatccaaaaatctgtagttactccttttgatatg
atatctgcaaatacttcttcaaagaaaggttgtagaaaaaataaacattctatggataca
aaagaactttttgttattacagataaaacatctccagaagatattaccaaatatattaaa
caactggaatacgaaatgaaagaagcagctaaagaacttgaatttgaaaaagcagctgta
ttacgtgatcgaattaaagttacacgtgaacaatttttactcatgagttaa
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