Lawsonia intracellularis PHE/MN1-00: LI0270
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Entry
LI0270 CDS
T00354
Symbol
ygcA
Name
(GenBank) 23S rRNA methylase
KO
K02427
23S rRNA (uridine2552-2'-O)-methyltransferase [EC:
2.1.1.166
]
Organism
lip
Lawsonia intracellularis PHE/MN1-00
Brite
KEGG Orthology (KO) [BR:
lip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lip03009
]
LI0270 (ygcA)
Enzymes [BR:
lip01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.166 23S rRNA (uridine2552-2'-O)-methyltransferase
LI0270 (ygcA)
Ribosome biogenesis [BR:
lip03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LI0270 (ygcA)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
FtsJ
Methyltransf_31
Methyltransf_25
Ubie_methyltran
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
CAJ54326
UniProt:
Q1MRQ0
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All DBs
Position
complement(335173..335775)
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AA seq
200 aa
AA seq
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MKPYRDYYFLKAKHEKYPARSIYKLKEIDNRFCLFQKGMSVLDLGASPGSWSLGAAEKVG
KTGRVVSCDIQTITIPLPSNVSFFQEDIFHRSDSFNNILIKEGPFHVIMSDMAPQTTGVK
ITDHSRSLELCLEALAIAKCYLLQQGSFIVKIFMGADTIELVKEMRQHFERVTSFKPCSS
RTKSKEIFYVGLGFKRFTTS
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgtatagagactattattttcttaaagctaaacatgaaaaatatcctgcacga
tctatttataaacttaaagaaatagataatcgtttttgtttatttcaaaaaggaatgagt
gttcttgatttaggagcatctccaggttcatggtcccttggtgctgctgaaaaagttgga
aaaacagggagagtggtatcttgtgatattcaaacaataactatccctttaccttctaat
gtttctttttttcaagaagatatttttcatcgttcagactcatttaataatatactaata
aaagaaggtccttttcatgttataatgagtgatatggctcctcaaacgacaggggtaaaa
attacagatcattctagatctcttgaattatgcctagaggcacttgctatagctaagtgc
tatctattacaacaaggtagttttattgtgaaaatatttatgggagctgatactatagag
cttgtaaaagaaatgcggcagcattttgagagagttacatcttttaaaccttgtagctct
cgtacaaaaagtaaagaaatattttatgttggattaggttttaaaagatttactacttct
taa
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