Lawsonia intracellularis PHE/MN1-00: LI0407
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Entry
LI0407 CDS
T00354
Name
(GenBank) Geranylgeranyl pyrophosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
lip
Lawsonia intracellularis PHE/MN1-00
Pathway
lip00900
Terpenoid backbone biosynthesis
lip01100
Metabolic pathways
lip01110
Biosynthesis of secondary metabolites
Module
lip_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
lip00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
LI0407
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
lip01006
]
LI0407
Enzymes [BR:
lip01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
LI0407
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
LI0407
2.5.1.29 geranylgeranyl diphosphate synthase
LI0407
Prenyltransferases [BR:
lip01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
LI0407
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
CAJ54462
UniProt:
Q1MRB4
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All DBs
Position
499089..499991
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AA seq
300 aa
AA seq
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MNFLHHNYQSILKQRVTLIEDFLKTCIQENNISSTLQHAMNYSLLAGGKRLRAVLCISSA
ALFDLSPTSILPFAAGIEMIHTYSLIHDDLPAMDDDDFRRGKPSCHKAFNEALAILAGDA
LLTDAFTFMSTLNSIVPSNNILVAIHEIAQAAGSNGMVKGQSMDIEHTGVSDVSFNTLCI
IHEYKTGALFRASCTTGAMLAGANESAIYALKCYGEALGAAFQITDDILNVTADSITLGK
PTRSDQEKGKITYPSLLGLEKSKKLAEEKIHLAISSLDTFTGDEVLFLKEVANSLLTRTH
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgaactttctccatcacaactatcaaagtatattaaaacaacgtgttacacttattgaa
gattttcttaaaacatgtattcaagaaaataatatctcttctacccttcaacacgctatg
aactatagtttacttgcaggaggaaaaagactaagagctgtattatgtatttcttcagca
gcactttttgatcttagccctacctctattttaccttttgctgctggcattgaaatgata
catacttactcactaattcatgacgatttgcctgcaatggatgatgatgattttcgtaga
ggtaagccttcttgtcataaagcctttaatgaagctttagctattcttgcaggggacgca
ctattaacagatgcttttaccttcatgagtacattaaactctatagtaccatctaacaat
atattagttgccattcatgaaatagctcaagcagctggaagtaatggaatggtaaaagga
cagtcgatggatatagagcatactggtgtatccgatgtgtcttttaatacactatgcata
atacatgaatataaaactggagccctatttcgtgcatcatgtactacaggcgctatgtta
gctggagcaaatgaatctgcaatttatgctttaaaatgttatggggaagcactaggtgca
gctttccaaataactgatgatatcctaaatgttactgcagatagtataacccttggaaaa
ccaactagaagtgatcaggaaaaagggaaaataacatatccttccctactaggacttgaa
aaaagtaaaaaattagctgaagaaaaaatacatcttgcaatatctagtctagatactttt
actggcgatgaagttttatttcttaaagaggttgcaaatagtcttttaacaagaactcac
taa
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