KEGG   Lawsonia intracellularis PHE/MN1-00: LI0548
Entry
LI0548            CDS       T00354                                 
Symbol
yscV
Name
(GenBank) putative type III secretion pore protein
  KO
K03230  type III secretion protein V
Organism
lip  Lawsonia intracellularis PHE/MN1-00
Pathway
lip03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:lip00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    LI0548 (yscV)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:lip02044]
    LI0548 (yscV)
Secretion system [BR:lip02044]
 Type III secretion system
  Type III secretion core apparatus
   LI0548 (yscV)
SSDB
Motif
Pfam: FHIPEP DUF3517 DUF6121
Other DBs
NCBI-ProteinID: CAJ54602
UniProt: Q1MQX5
LinkDB
Position
666726..668828
AA seq 700 aa
MSLFAKAQSTVGVITRNNDITMVLLLVTVIALMIIPLPTPLVDTLIGINMGLSFLIVMMC
MYVKTVLDFSVFPTMLLFTTLFRVGLNITTTRLILLQADAGEIIFIFGEFALGGNFVVGA
VVFVILTIVQFLVIAKGAERVAEVGARFTLDAMPGKQMSIDADMRAGVIDMEEAQKRRAR
INQESQMYGAMDGAMKFVKGDSIAGMIIAVVNIVGGTIIGVTQHGMAASDALHVYGILTI
GDGLVSQIPSLLISIAAGILITRTGDSAENVGSQIGEQIFNQPKALLMAGGVVFLIALVP
GFPKIQLFAISATLAGIGYTLKLIMTNPAPKNAKQSIAKTLEPTTSPSKKSSTEQKESKE
EFSPTVPIILDISQQMSEELDYDSLNDELITLRRVLYFDLGVPFPGINLRISSKLHDLTY
SLMINEIPITKGTLEKGMVLARDTKENLAMLGVEPEEKEKFLPDVESLWVPDSKKALLER
AGITCMTHSRILAYHLSLVLSRHASNFLGMQETKYLLDKMEERAPDLVRETTRLLPVQRI
AEIFQRLVQEQISIRDLRSILEALIEWSPKEKDTVMLTEYVRSALKRQISYMYSKGQNML
PAVLLDPNVEETIRKSVRQTSAGAFLALDPETTQIFMASLKEFASETNLTYTQKPVLITS
MDIRRYVRRLIEGDYYNLPVVSYQELTPEISVQPVGRIRF
NT seq 2103 nt   +upstreamnt  +downstreamnt
atgagcttattcgctaaagctcaatcgactgtaggtgttattacacgaaataatgacatc
actatggtccttttattagtgactgtcatagcattaatgattatcccattacctactcct
ttagtggatacactgattggtattaacatgggactttcatttcttattgtaatgatgtgt
atgtatgttaagacagttttagatttttctgtttttcccactatgctcctttttacaacc
ctgttcagagttggtttaaatatcacaacgacaagacttattttactccaagcagatgct
ggagaaatcatttttatttttggtgaatttgccttaggtggaaactttgttgttggagca
gttgtctttgtcattctaacaattgttcagttccttgttattgcaaaaggagctgaacgt
gttgccgaagttggtgcacgctttacccttgatgctatgccaggaaaacagatgtctatt
gatgccgacatgcgcgcaggcgttattgacatggaagaagcccaaaaacgtcgtgcacga
ataaatcaagaaagccaaatgtatggagctatggacggtgctatgaaatttgttaaaggt
gatagcatcgcaggaatgataattgctgttgttaatattgttggaggtaccattattggg
gtcacacaacatggaatggctgcctctgatgccttacatgtttatggtattctgaccatt
ggtgatggtttagtctcacaaattccatctctgttaatctccattgcagcagggattctg
attactcgtactggtgactcagctgaaaatgttggttctcaaattggtgaacaaatattt
aatcagcctaaagctcttttaatggcaggtggagttgtatttcttattgcactagttcca
ggttttccaaaaattcaactttttgccatttcagctactcttgcaggtattgggtataca
ctaaaacttattatgactaaccctgcacctaaaaatgcaaaacaaagtatagcaaaaaca
ttagaacctacaacatcaccttcaaaaaaatcttctactgaacagaaggaatcaaaagaa
gagttttcaccaactgtacctattatattagatatatctcaacaaatgagtgaagagtta
gattatgattcactcaatgatgaacttataacattacgtcgtgttctatactttgatctt
ggtgtaccattccctggcattaatcttcgcatctcatcaaagctacatgaccttacttat
tccttaatgattaatgagattcctataaccaaaggaacacttgaaaaaggtatggtctta
gcaagggatacaaaagaaaatttggcaatgcttggagtggaacctgaagaaaaagaaaaa
tttcttccagatgttgagtctctttgggttccagactctaaaaaagcattgcttgaacgg
gcaggaataacatgtatgacacatagtcgcattcttgcttaccacttatcccttgtcctt
tcacgccatgcttcaaactttctgggcatgcaagaaacaaaatatctcttggataaaatg
gaagaacgtgctcctgatttggttagagaaacaactcgattattacctgtacaaagaatt
gctgaaattttccaacgtcttgtacaagaacaaatttctatacgtgacttaagaagtatc
cttgaggctcttattgagtggagccctaaagaaaaagatactgttatgctcacagaatat
gtccgaagtgcgttaaaacgtcaaataagttacatgtactctaaaggtcaaaacatgcta
cctgctgttcttcttgatccaaacgtagaagaaactattagaaaatctgtaagacaaact
tctgctggggccttccttgcattagatccagaaacaacacaaatatttatggcatccctt
aaagagtttgcatcagagaccaatctaacctatacccaaaaacctgttttaatcacttca
atggatattcgtcggtatgtacgtagactcatagagggagattattacaaccttcctgta
gtgtcataccaagaacttacaccagaaatttctgtacaacctgttggaagaatacgtttc
taa

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