Lawsonia intracellularis PHE/MN1-00: LI0672
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Entry
LI0672 CDS
T00354
Symbol
pcrA
Name
(GenBank) Superfamily I DNA and RNA helicases
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lip
Lawsonia intracellularis PHE/MN1-00
Pathway
lip03420
Nucleotide excision repair
lip03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LI0672 (pcrA)
03430 Mismatch repair
LI0672 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lip03400
]
LI0672 (pcrA)
Enzymes [BR:
lip01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LI0672 (pcrA)
DNA repair and recombination proteins [BR:
lip03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LI0672 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
LI0672 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
HHH
Motif
Other DBs
NCBI-ProteinID:
CAJ54726
UniProt:
Q1MQK1
LinkDB
All DBs
Position
842275..844410
Genome browser
AA seq
711 aa
AA seq
DB search
MFDTSTLNSAQLEAVTAPDGPVLVIAGAGSGKTRTIIYRLAWLAEQGIPPSSMLLLTFTR
KASQEMLHRATMLLNYSLGDVNGGTFHSIAFSTLRQYKPSWATGKVTIIDAQDTLTSLQH
CKEELKIAKGDRSFPKLQTVAALLSRARNKEITFKELIQKDSPHLISHIDSLTTLVERYT
TYKKQQNLLDYDDLLFEFELLLKGDESKNIPPLAPLFQERYQYIMVDEYQDTNRVQARLV
RLLSGNTNNTMAVGDDAQSIYAFRGATVNNILEFPNLFPGTKIIRLEENYRSTQPILDTA
NAILKESQEGFHKHLFTNRIGGEKVRLIRSLSDLTQANLIANRIKELLSIYPPKEIAILF
RAGYQSYHLEIALAKHTIRFRKYGGLKYTEAAHIKDMMAFIRLIVNPLDMPSFLRIAAFS
KGVGPKTAQKIYQIAAQGNFLELQKVCNKYPDLLSDMTLLDEIRQQPLEPTEILTKVFEH
YQPKLIVHFPEDWPRRQQGLEELIHIASAYTDLEQFIADLSLETPEEELNEEESIVLSTI
HSAKGLEWDAVIILDLVEDRFPSRHSLIRSEDFEEERRLMYVACTRAKKQLELSVPTTLY
NKQYGCNEPAIPSPFVQQLPSIVIEEWQEGYSGNIYKKITIPTNQPDSKTCSQIPASNNT
YNKEELSYSFCRHKIFGRGKIIEYLLPDKCRVNFPGFGLKVILKDYLTIED
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatacctctactcttaatagtgctcaacttgaagctgtcactgcaccagatggt
cctgtccttgttattgcaggagcaggtagtggtaaaactcgaactattatctatagactt
gcctggttagctgaacaaggtattcccccatcttctatgttacttcttacctttactcgt
aaagctagccaagaaatgcttcatcgtgctacaatgcttcttaattatagtcttggtgac
gttaatggtggaacattccatagcatagctttttctactctacgtcaatataaaccctcc
tgggcaacagggaaagtcactataatagatgcacaagacaccctaacttctctccaacac
tgtaaagaagaactcaaaattgctaaaggtgatcgttcgtttcccaaactacaaacagtt
gcagctttattaagtagagcaagaaataaagaaataacatttaaggaacttatacaaaaa
gactctcctcatcttatctcccatattgattcattaacaactcttgttgaacgttatact
acatataaaaaacaacaaaatttacttgattatgacgatcttctttttgagtttgaatta
cttcttaaaggtgatgaatcaaaaaacattcctccattagctccattatttcaagaacgt
tatcaatatattatggtagatgaatatcaagacacaaatcgtgtccaagcacgtcttgtt
cggcttctttctggaaacacaaataatacaatggctgtcggggatgatgcacaatctatt
tatgcttttagaggagcgacagtaaacaatatcctagaatttcctaatctattcccaggg
accaaaattatacgtctagaagaaaattatcgttctacccaacctatattagatacagca
aatgctatacttaaagagtcacaagaaggttttcataaacatttatttactaatcgtata
ggaggagaaaaagttcgccttatacgatcattaagcgatcttactcaggcaaatcttatt
gctaatcgaataaaagaattactatctatatatcctcccaaagaaattgcaatcctattt
agagcaggatatcaatcttaccatttagaaattgctcttgccaagcatactattcgattc
agaaaatatggcggcctcaaatatactgaagctgcccatattaaagatatgatggcattt
ataaggcttattgttaatccactagatatgccatcatttttacgtattgctgccttttca
aaaggagttggccccaaaacagctcaaaaaatttaccaaatagcagcacaaggaaatttt
ttagagcttcaaaaagtttgtaataaataccctgatcttcttagtgatatgactctactt
gatgagatacgacaacagcctttagaacctacagaaatattaaccaaagtctttgaacat
tatcaaccaaaacttatagtccatttccctgaagattggccacgccgtcaacaagggctt
gaagaacttatacatattgcttctgcctatacagatcttgaacaatttattgccgatctt
tctttagagactccagaagaagagctgaatgaagaagaaagcattgtgctttctactatt
cattctgcaaaaggtcttgaatgggatgctgttattatccttgacttagtagaagataga
tttccttctagacattcgcttatacgctctgaagattttgaagaagaaagacgccttatg
tatgtagcatgtactagagccaaaaaacagcttgaactttctgttcctactacactctat
aataaacaatatggatgcaatgaacctgcaatcccaagcccttttgtacaacaacttcca
agtatagtaatagaggagtggcaagaaggttattcaggcaacatatataaaaaaattaca
atacctactaatcaaccagatagcaaaacatgttcccaaatacctgcttctaacaataca
tataataaagaagagttatcttatagtttttgtcgacacaaaatttttggtagaggtaaa
attatagaatatttattacctgataaatgtagagtaaacttccctggatttggccttaaa
gttatcttaaaagactacctaactattgaagattaa
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