Lawsonia intracellularis PHE/MN1-00: LI0894
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Entry
LI0894 CDS
T00354
Symbol
himD
Name
(GenBank) Bacterial nucleoid DNA-binding protein
KO
K05788
integration host factor subunit beta
Organism
lip
Lawsonia intracellularis PHE/MN1-00
Brite
KEGG Orthology (KO) [BR:
lip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lip03032
]
LI0894 (himD)
03036 Chromosome and associated proteins [BR:
lip03036
]
LI0894 (himD)
03400 DNA repair and recombination proteins [BR:
lip03400
]
LI0894 (himD)
DNA replication proteins [BR:
lip03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LI0894 (himD)
Chromosome and associated proteins [BR:
lip03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
LI0894 (himD)
DNA repair and recombination proteins [BR:
lip03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
LI0894 (himD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_bac_2
HU-HIG
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
CAJ54948
UniProt:
Q1MPX9
LinkDB
All DBs
Position
1114982..1115257
Genome browser
AA seq
91 aa
AA seq
DB search
MNKSELVKSLSEQANISLDEATLVVNTFVDSMKESLLKGGRVEVRGFGSFKVKEYEGYAG
RNPRTGEKVVVQPKRLPFFRAGKELKEYLNS
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaagtgaacttgtgaagtctttatctgaacaggcaaatatttctttagatgaa
gctacattggttgttaatacgtttgtagatagcatgaaagaatctcttctcaaaggtggt
cgagttgaggttcgtggatttggtagttttaaagtaaaagagtatgaaggatatgctggc
cgtaatcctcgtacaggcgaaaaggttgttgtacaaccaaaacgtcttccattttttcgt
gcaggtaaagagctgaaggaatatcttaatagctag
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