Lawsonia intracellularis PHE/MN1-00: LI0939
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Entry
LI0939 CDS
T00354
Symbol
carB
Name
(GenBank) Carbamoylphosphate synthase large subunit (split gene in MJ)
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
lip
Lawsonia intracellularis PHE/MN1-00
Pathway
lip00220
Arginine biosynthesis
lip00240
Pyrimidine metabolism
lip00250
Alanine, aspartate and glutamate metabolism
lip01100
Metabolic pathways
lip01110
Biosynthesis of secondary metabolites
lip01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
lip00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
LI0939 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
LI0939 (carB)
00220 Arginine biosynthesis
LI0939 (carB)
Enzymes [BR:
lip01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
LI0939 (carB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
MGS
CPSase_L_D3
ATP-grasp
ATPgrasp_Ter
Dala_Dala_lig_C
ATP-grasp_3
ATP-grasp_4
ATP-grasp_5
CoA_binding_2
MucBP_2
PriA_C
Motif
Other DBs
NCBI-ProteinID:
CAJ54993
UniProt:
Q1MPT4
LinkDB
All DBs
Position
complement(1171427..1174657)
Genome browser
AA seq
1076 aa
AA seq
DB search
MPKRSDIKKIMVIGSGPIIIGQACEFDYSGTQGIKALKEEGYNVVLVNSNPATIMTDPTL
ANHTYIEPLELETVTAIIRKERPCALLPTLGGQTALNIALNLAKSGILHECGTELIGASA
DVIEKAESREKFRQSMENIGLKVPSSAIAKTIEEVHQIALNIPFPVIVRPAFTLGGTGGG
IAYNMEDLELIAIQGLTASPTNEVMIEQSVIGWKEFEMEVVRDAADNCIIICSIENLDPM
GIHTGDSITVAPAQTLSDIEYQKMRNASIAIMREIGVKTGGSNIQFGVNPKNGELVVIEM
NPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELRNDITYKTSAAFEPAIDYCVVKIPR
FTFEKFPGAKDELTTSMKSIGEVMAIGRTFKEAFQKGLRSLETGLPGFNSSNYTFTEEEL
PILLRNPNSLRIVAIHQALSSGMSLNHIHTLTHIDPWFLYQFKELIEMELILHNFALSNT
ITASNPELRPLLLKAKQFGFSDKQLAIAWERPESDIRNLRKELDIVPTYYLVDTCAAEFE
AFTPYYYSTYESAKELSLEKKKKVIIIGGGPNRIGQGIEFDYCCCHAAYALKDSNIEAIM
INSNPETVSTDYDTSDRLYFEPLTFEDVMNIIAQEQPDGVVVQFGGQTPLNLALPLVRAG
VPILGTSPEAIDRAENRSRFQALLQKLKLQQPANGTATSINEAASIAKTIGYPIVVRPSY
VLGGRAMQIIYEEKELIHYFSLYGKDCNLDRPILIDQFLEYAIEVDVDALSDGTNVYIAG
VMEHIEEAGIHSGDSSCVIPPHSLSQELIEDIKSQTTALAKELQVIGLMNIQFAIKDNVI
YILEVNPRASRTTPFVSKATGVPLPYLAMQVMLGVSLKELNPWAIEKTGYVSVKESVFPF
HRFPGVDIVLGPEMKSTGEVMGIASTFEEAFLKGQQGVGQYLPSTGKVFFSVNDRDKPLL
IDIAKQYLQLGFELIATSGTAVLLSKNNIPVQHVLKVYEGRPNIIDLIKNGDIALVINTP
SGKQTTNDSRTIRQATLQYNIPYSTTLAGAKAIARAIQASRDTPIQVKSIQEYYNL
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagcgttcggatataaaaaaaattatggttattggttctggccccatcattatt
ggtcaagcatgtgagtttgactactctgggacacaaggcattaaagccctcaaggaggag
ggatataatgttgtccttgtcaactctaatccagcaactataatgacagatccaaccctt
gcaaatcatacttatattgaacctcttgaattagaaacagttactgcaattattcggaaa
gaacgcccatgtgcattacttcctacactaggaggacaaacggcattaaatatagcactt
aatttggctaaatctggaatacttcatgagtgtggaacagaactcattggagcaagcgca
gatgtcatagaaaaagcagaaagtcgtgaaaaattcagacaatcaatggaaaatattggc
cttaaagttccatctagtgctattgcaaaaactatcgaagaagtccatcaaattgcatta
aatatcccatttcctgttattgttcgccctgcatttacacttggaggtacaggtggagga
attgcttataacatggaagatcttgaactaattgcaatacaaggacttactgctagtccc
acaaatgaagtaatgatagaacaatctgtcataggatggaaagagtttgaaatggaagtt
gttcgggatgcagctgacaattgtatcattatttgttccattgaaaaccttgaccctatg
ggtattcacacaggcgactctattactgttgcaccagcacaaacgctttcagatatagaa
taccaaaaaatgcgtaatgcctccatagctattatgcgtgaaattggtgtaaaaacagga
ggatcaaatatccaatttggtgttaatcctaaaaatggagaacttgttgttatagaaatg
aacccacgtgtatcacgatcttctgctcttgcttcaaaagcaacaggttttcctattgcc
aaaattgcagcaaaacttgcagtaggttatactcttgatgagctaagaaatgatattaca
tataaaacctcagcagcttttgaaccagcaatagattattgtgttgttaaaatccctaga
tttacttttgaaaagtttcctggtgcaaaagatgaattaacaacgtccatgaaaagtatc
ggagaagtaatggccattggtcgtacttttaaagaagcttttcaaaaaggactacgatca
cttgaaactggtcttcctggatttaatagctctaactatacatttacagaagaagaactt
cctatacttttaagaaaccctaattcattacgtattgttgctattcatcaagcattatct
tctggaatgagtttaaaccatattcatactcttacacatattgatccatggtttttgtat
caattcaaagaactcatagaaatggagttgatacttcataactttgcactatctaataca
ataactgcttctaatcctgaactaaggcctttattacttaaagctaaacagtttggattt
tctgataaacagcttgctatagcctgggaacgaccagaatctgacatccgtaacttacga
aaagaactagatatagttccaacatactatcttgtagatacatgtgctgcagaatttgaa
gcattcactccttattattattctacctatgagtcagcaaaagaactctctttagaaaaa
aagaaaaaagttattataattggtggtggacccaatcgaattggtcaaggaatagagttt
gattattgttgttgtcatgcagcatatgctctcaaagatagtaatatagaagcaattatg
attaactccaatccggagacagtatctactgattatgatacttctgatagactctacttt
gaacctctaacatttgaagatgtaatgaatattattgctcaggagcaaccagatggtgtt
gttgtccagtttggaggccaaactcctcttaatcttgcattaccacttgttcgtgctggc
gtaccaattctaggaacaagccctgaggctatagatagagcagaaaatcgatcaagattc
caagcattactccaaaaattaaaactacaacaacctgcaaatggtacagcaacttctata
aatgaagcagcttctattgccaaaactattggatatcccatagttgtccgcccaagctat
gtccttggcggtagagctatgcaaattatttacgaagaaaaagagcttatacactacttt
tctctatatggaaaagactgtaatttagaccgaccaatacttattgatcaattccttgaa
tatgctattgaggtggatgttgatgctctctctgatggaactaatgtatatattgctgga
gtaatggagcatatcgaagaagcaggcattcactctggggattcatcttgtgttatccct
ccccactcattatcccaagaattaatagaagacataaaaagtcaaacaacagctcttgcc
aaagaacttcaagttattggactcatgaatatccaatttgccataaaagataatgttatt
tatatattggaagttaaccctagagcatcaagaacaactccatttgtctccaaagcaaca
ggagtaccccttccttacctagcaatgcaagttatgcttggagtaagtcttaaagagctc
aatccttgggctatagaaaaaacaggatatgtttctgtaaaagaatctgttttccctttt
caccgcttccctggagtagatattgtattagggcctgaaatgaaatctacaggagaagtt
atgggaatagcttcaacctttgaagaagcttttttaaaaggacagcaaggtgtaggacag
tacctaccaagtacaggtaaagtatttttttctgttaatgatagagataagcctcttctt
atagatatagctaaacaatatctccaactaggctttgaacttattgcaacatcaggaacc
gctgtactactcagtaaaaataacattcctgtacaacatgttcttaaggtatatgaagga
cgacctaatattatagatcttataaaaaatggcgatattgctttagttataaacacacca
tcaggaaaacaaacaactaatgactctagaactatcagacaagccacattacaatataat
atcccatatagcacaacacttgccggagcaaaagctatcgcacgagctatccaagcttca
agagatactcctattcaggtaaaaagtattcaagaatattataatttgtaa
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