Lawsonia intracellularis PHE/MN1-00: LI0982
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Entry
LI0982 CDS
T00354
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit/40 kD subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lip
Lawsonia intracellularis PHE/MN1-00
Pathway
lip03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lip00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LI0982 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lip03021
]
LI0982 (rpoA)
03400 DNA repair and recombination proteins [BR:
lip03400
]
LI0982 (rpoA)
Enzymes [BR:
lip01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LI0982 (rpoA)
Transcription machinery [BR:
lip03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LI0982 (rpoA)
DNA repair and recombination proteins [BR:
lip03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LI0982 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
AMIN-like
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
CAJ55036
UniProt:
Q1MPP1
LinkDB
All DBs
Position
1208901..1209944
Genome browser
AA seq
347 aa
AA seq
DB search
MLFREGTRLINSRNWAKLVRPEAVINNMESNTTTYGRFEYEPLERGYGITIGNALRRVLL
SSLQGAAFVSVKILGVQHEFTTIPGILEDVTDIILNLKQVRLAMDTDEPQHLSLFVSKKG
IVTAADIQTNQHVEVLNPEQHIATLTEDIELRMEFEVRMGKGYVPAEMHEDLHEEIGLIK
LDSSFSPIRNVTYVVEQARVGQMTNYDKLVLEVWTDGSVSPEDAIAYSAKIIKDQISVFI
NFDERISGSGGNEGSGSSDLNDNLFKGIDELELSVRATNCLRSANISTVGELVQKAEADM
LKTKNFGKKSLDEIKALLTSMGLDFGMKIDGFEKKYQEWKRKQHHEA
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgctctttagagaaggaactaggcttattaattcacgtaactgggcaaaacttgtacgt
ccagaagcagtgataaataatatggaatccaatactacgacatacggacgttttgagtat
gaaccacttgaacgtgggtatggtattactattggtaatgcattacgaagggtgttactt
tcatctcttcagggtgctgcatttgtatctgtaaaaattcttggtgttcaacatgagttt
acaactattcctggaatacttgaagatgtaacagatattattcttaacctgaaacaggtt
cgtttagctatggatacagatgaaccacagcacctttctctttttgtatctaaaaaaggg
attgttactgccgctgatatccaaacgaatcaacatgttgaagttttaaatccagaacaa
catattgcaacattaacagaagatattgagcttcgaatggagtttgaagttcgtatgggt
aagggctatgttcctgcagaaatgcatgaagatcttcatgaggaaattggtcttattaag
ttagattcaagtttttcaccaattcgtaatgtaacttatgtagtagaacaagcacgtgtt
ggtcagatgacaaactatgataagttagtgctggaagtatggacagatggttcagtttct
cctgaagatgctattgcatacagtgctaaaattatcaaagatcaaatttctgtttttatt
aattttgatgagcgtatctcagggagtggtggaaatgaaggtagcggtagttcagatctg
aatgataatctgtttaaaggtattgatgaacttgaactttctgtacgtgctacaaattgt
ttacgtagtgctaatatttcgactgttggagagcttgtccaaaaggcagaagctgatatg
ttaaagacaaagaattttgggaaaaaatctcttgatgaaattaaggcacttcttactagt
atggggcttgattttggtatgaagattgacggatttgagaaaaaataccaagaatggaaa
aggaagcaacatcatgaggcataa
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