Lawsonia intracellularis PHE/MN1-00: LI1005
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Entry
LI1005 CDS
T00354
Symbol
truB
Name
(GenBank) Pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lip
Lawsonia intracellularis PHE/MN1-00
Brite
KEGG Orthology (KO) [BR:
lip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lip03016
]
LI1005 (truB)
Enzymes [BR:
lip01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LI1005 (truB)
Transfer RNA biogenesis [BR:
lip03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LI1005 (truB)
Prokaryotic type
LI1005 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Phage_tail_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
CAJ55059
UniProt:
Q1MPL8
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Position
1237651..1238547
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AA seq
298 aa
AA seq
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MEQYHGLLVVNKPQGITSAACTYYLKKMGQRKIGHAGTLDPMAQGVLLILLGHGTKIFNY
LLEGGEKVYKATVCFGQTTDTWDREGKVLTTQSWEHITSEEVREHIFSWKGINKQLIPPY
SAAKYQGQPLYALSRKGENTPHKTKKIEISCVEVLTINLPYVTFRVTCSSGTYIRSLAHS
LGMRMRCGAVLTELTREYSYPFGLDTAIPFEDLVTNPDLLLDRIIPITAALPDWSIVVVN
KSEVSQIKNGIPLFRRDTTCLSGKKTVLLLEDGTPLALAEAMNTSNGAVWTLLRGLWT
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggaacaatatcatggtcttttggttgtaaataagcctcaaggaattacttcagcagct
tgtacgtattatttaaaaaaaatggggcaaagaaaaattggccatgcaggaacattagat
cctatggcacaaggtgtgttgcttatccttttaggacatgggacaaaaatttttaactat
cttcttgaaggaggagaaaaagtatataaggcaacagtttgttttggacaaactacagat
acttgggatagagaaggaaaagtccttacaacacagagttgggaacatattacttcagaa
gaggttagggaacatattttttcttggaaaggtataaacaagcagcttatcccaccatat
tctgctgctaaatatcaggggcagcctttatatgctttatcccgtaaaggggaaaacact
ccacataaaacaaagaaaatagaaatttcatgtgtggaagttcttactattaacctccca
tatgtaacctttcgagttacatgtagttctggtacctatatacgctctctagcccacagc
ttggggatgcgaatgaggtgtggggctgttctcacagagctgactcgagagtatagttat
ccttttgggcttgatacagcaattccatttgaggatcttgtaaccaatccagatttatta
ctagatcggattattcctattacagcagcattgcctgactggtcaattgttgttgttaat
aaaagtgaggtttcacagattaaaaatggtattcccctttttagaagagatacaacatgt
ctctcaggtaaaaagacagtacttttgctggaagatggaacacctttagcacttgctgaa
gcaatgaatacttctaatggagctgtatggactttactcagaggattatggacataa
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