Lawsonia intracellularis PHE/MN1-00: LI1006
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Entry
LI1006 CDS
T00354
Symbol
pnpA
Name
(GenBank) Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
lip
Lawsonia intracellularis PHE/MN1-00
Pathway
lip03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LI1006 (pnpA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lip03019
]
LI1006 (pnpA)
03016 Transfer RNA biogenesis [BR:
lip03016
]
LI1006 (pnpA)
Enzymes [BR:
lip01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
LI1006 (pnpA)
Messenger RNA biogenesis [BR:
lip03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LI1006 (pnpA)
Transfer RNA biogenesis [BR:
lip03016
]
Prokaryotic type
tRNA degradation factors
LI1006 (pnpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
KH-I_KHDC4-BBP
KH_2
KH_NusA_2nd
Phage_Mu_Gp27
Motif
Other DBs
NCBI-ProteinID:
CAJ55060
UniProt:
Q1MPL7
LinkDB
All DBs
Position
1239053..1241263
Genome browser
AA seq
736 aa
AA seq
DB search
MSFRKPPIRLATQVGGKEIIFETGYMATQANGSLTVQCGGTIVLVTVCSQPLESDKGFFP
LTVEYSEKMYAAGRIPGSFFRREIGRPSERETLISRLIDRPIRPMFPKGLAEDVQILANV
ISSDQENESDILAVTGASAAVMLSSLPFECAIAAGRIGRLNGQFVLNPTINEIELSDLNI
VFAASSEAVVMVEGEANVVEEEIIIEALEWGHKEIQPIITLQNKIQELAGRNKIPFVPVE
ENIVFSKKVEELADKFGIVEAMQVKEKQFRKEARKAVKEKVLAILKEDPLYAEHSDILNT
VSEIIGNLEKKIVRQRIVKENLRIDGRDTITVRPIAIEVGLLPRTHGSALFTRGETQSLC
ITTLGSSTDNQRVDSLAGDTVKNFMLHYNFPPFSVGEVKPVRVSRREIGHGALAEKALKY
ILPSQNTFPFTVRIVAETLESNGSSSMAAICGGCLSLMDAGVPISAPVAGVAMGLIKEDD
QFIVLTDIIGDEDAFGDMDFKIAGTTKGITAVQMDIKITGLTTDVMRKAMEQAREARIHI
LSEMAKALDVPRSNLSQYAPQHAELVVNPDAIRMIIGPGGKNIKQITTVTGAAIDINDSG
KISIFAPTSEAMEQAKQMILYYDQRPELGKNYKGKVRKILEIGAILEIMPNVEAFVHISQ
LAVEHIAQVTDVVQLGEDMIIKVIEITGDRVRASRKAVLLEEEGITWTPEESSRFSKGNR
NGDRSRHNNRERTRRT
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgagctttagaaaaccccccattcgtttagctactcaagttggtggtaaagaaattatt
tttgaaactggttatatggctacacaggcaaatggttctcttacagttcaatgtggtggt
accattgttcttgtaacagtttgttctcaaccccttgagtctgacaagggttttttcccc
cttactgtggaatactcagaaaagatgtatgctgcaggaagaatccctggaagctttttt
agacgagaaataggacgtcctagtgaacgtgaaacacttatttctcgactaattgatcgt
cctattcgtccaatgtttcctaaaggcttagcagaagatgtccaaattttggctaatgta
atttcttcagatcaagaaaatgaatctgatattttagcagtaacaggggcatcagcagct
gtaatgctttcttctttaccttttgagtgtgctatagcagctgggcgtattggacgttta
aatggtcagtttgtattaaatcctacaattaatgaaatagaattaagtgatttaaatatt
gtttttgctgcgtcttcagaggctgttgtaatggttgaaggtgaagcaaatgttgttgaa
gaggaaatcattattgaggctcttgaatggggtcataaagaaattcagccaatcataacc
ctccaaaataaaatccaagaacttgctggacgaaataaaataccatttgttcctgttgaa
gagaatatagttttttctaaaaaagtagaagaattagcggataaatttggtatagtagaa
gctatgcaagttaaagaaaagcaatttcgtaaagaagctcgtaaagctgttaaggaaaaa
gtgttagctatattaaaagaagatcctctttatgctgaacatagtgatatacttaataca
gtaagtgaaattattggaaatttagaaaagaagattgttcgtcaaagaatagtaaaagaa
aatttacgtattgatggacgtgatacaataacagtgcgtcctatagcaattgaggtaggt
ttacttccacgtacgcatggttcagccctctttactcgtggtgaaacacagtcattatgt
attacaacattaggaagttcaacagataatcagagagtagattcacttgcaggagataca
gttaaaaattttatgcttcattataatttccctcctttttctgtaggagaagtaaagccc
gttcgtgtatctagacgtgaaattggtcatggtgcattagcagaaaaggcacttaaatat
attcttccttctcaaaatacgtttccttttacagtccgtatcgttgctgaaacattagaa
tctaatggctcttcttctatggctgctatatgtggtggttgtttatcattgatggacgct
ggtgtcccaatttctgctccagtggctggtgtagcaatggggctgattaaagaagatgat
caatttattgttttaacagatataattggtgatgaagacgcctttggtgacatggatttt
aagattgcaggcacaactaagggtattacagctgttcaaatggatattaaaattactggc
ttgactacagatgtaatgcgcaaagcaatggagcaagcacgtgaggctcgtatacatatt
cttagtgaaatggcaaaagcattagatgtcccacgttctaacctttcacagtatgcacca
caacacgctgagcttgtagtaaatcctgatgctattcggatgattattggtcctggtggt
aaaaatattaaacagattacaactgttactggtgcagctattgatattaatgatagtgga
aaaatttcaatttttgctcctacatctgaagcaatggaacaagcaaaacagatgatttta
tattatgatcaacgtccagaattaggtaaaaactataaggggaaagttcgtaaaatttta
gaaataggtgctattttagaaattatgcctaatgtggaagcatttgttcatatttcccaa
cttgctgttgagcatattgcacaggtgactgatgttgtacagctaggtgaagatatgata
attaaagttattgaaattacaggtgatagagtccgtgcaagtcgtaaagcagtattacta
gaagaagaaggtataacttggactcctgaagagagtagtcgtttttctaaaggaaatcgt
aatggtgatcgtagtcgtcacaacaatagagaacgtacacgtcggacataa
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