Lactobacillus intestinalis: KBW87_01030
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Entry
KBW87_01030 CDS
T08339
Symbol
rnmV
Name
(GenBank) ribonuclease M5
KO
K05985
ribonuclease M5 [EC:
3.1.26.8
]
Organism
liq
Lactobacillus intestinalis
Brite
KEGG Orthology (KO) [BR:
liq00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
KBW87_01030 (rnmV)
Enzymes [BR:
liq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.8 ribonuclease M5
KBW87_01030 (rnmV)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4093
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
UTW40511
LinkDB
All DBs
Position
215879..216448
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AA seq
189 aa
AA seq
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MVLNKKNFNAVVVVEGKDDTIRLKQFFPGIETIETNGSAVSKEVLAELKKLSQKRDIIVF
TDPDFNGERIRRIVSEAVPNAKQAFITREEGKPDKKGNSLGVEHASKEAIERALSDLYEV
KPEVSDITKKAYQNLGFVGGSNSKILREKVGIKLGIGYGNSKQFYKRLVTFGVSLDELVE
VVKEIENGK
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atggtcttgaataaaaagaattttaatgccgttgtcgtagttgaaggaaaagatgataca
attcgacttaaacaattttttcctgggatagaaactatagaaactaatgggtctgctgtt
tcaaaagaagttctggcagaattgaaaaagttaagccaaaaaagagatatcattgtcttt
actgatcctgattttaacggtgaaagaatcagaagaattgtttctgaggcagttcctaat
gccaaacaagcttttattacacgtgaagaaggaaaaccagataaaaaaggtaatagtctt
ggagttgaacatgcttcaaaagaagctattgagcgagctttgagtgacctttatgaagta
aaaccagaagttagtgacataactaaaaaagcttatcagaacctgggatttgttggtggt
agcaattctaaaattttacgtgaaaaagtgggcattaaacttgggattggatacggcaat
tctaaacaattttataaacgattagttacttttggcgtatctctagatgagttagtagaa
gtggtaaaggaaatagaaaatggcaaataa
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