Lactobacillus intestinalis: KBW87_02185
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Entry
KBW87_02185 CDS
T08339
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
liq
Lactobacillus intestinalis
Pathway
liq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
liq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KBW87_02185 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
liq03400
]
KBW87_02185 (ruvB)
Enzymes [BR:
liq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KBW87_02185 (ruvB)
DNA repair and recombination proteins [BR:
liq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KBW87_02185 (ruvB)
RecFOR pathway proteins
KBW87_02185 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
TIP49
nSTAND3
AAA_14
AAA_16
AAA_3
RNA_helicase
AAA_24
AAA_22
DUF815
ResIII
NB-ARC
TsaE
MCM
Bac_DnaA
NTPase_1
AAA_18
AAA_25
NPHP3_N
IstB_IS21
NACHT
AAA_PrkA
AAA_17
ABC_tran
Sigma54_activ_2
Rad17
AAA_11
Motif
Other DBs
NCBI-ProteinID:
UTW40723
LinkDB
All DBs
Position
423898..424914
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AA seq
338 aa
AA seq
DB search
MTPKDDSVTSGEVENASEEQMELTLRPQSLSQYLGQERVKKEMAIYIKAAKQRDEALDHV
LLYGPPGLGKTTLAFVIANELEVNLKSTSGPAIEKAGDLVALLSDLDPGDVLFIDEIHRL
AKPVEEVLYSAMEDYYIDIVIGEGQTTHAVHVPLPPFTLIGATTLAGQLSAPLRDRFGIV
EHMQYYTVKELKEIVERSSEVFHTKIAPEAAIELARRSRGTPRVANRLLKRVRDFAEVKG
EDTISLATTTYALKQLQVDDEGLDLTDRRILRTMIEGYRGGPVGIRTLAANIGEDIETIE
SLYEPYLLQQGFILLTPRGRVVTEKAYLQLGLPIPGKK
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgacaccaaaagatgattctgtgacttcaggcgaagttgaaaatgcttcagaagaacag
atggaattgactttgcgtccgcaaagtttaagccaatatttaggccaagaacgtgtaaaa
aaagaaatggcaatttatatcaaagctgctaaacagcgtgatgaagcactcgatcacgtt
cttttgtatggaccgccaggacttggtaaaactacgttggcttttgtaattgccaatgaa
ctagaggtaaacttgaaaagtactagtggaccagctattgaaaaagcgggtgacttagta
gcacttttgtcagatttagatcctggagacgttctatttattgatgaaattcaccgttta
gctaagccggttgaagaagtactttattcggcaatggaagactattatatcgatatcgtg
attggtgaaggacaaactacgcacgcagtccacgtcccactaccaccctttactttaatt
ggggccaccactcttgctgggcaattatctgcacctttgcgtgatcgtttcggaattgtg
gagcatatgcagtactacactgttaaagaacttaaagaaattgttgaaagatctagtgaa
gttttccatacaaaaattgcccccgaagcagccattgaacttgcgagaagatcaagaggg
accccgcgtgtggctaaccgtttattaaagagagttagagattttgcggaagttaaaggc
gaagatacaatttcccttgcaaccacaacgtatgccttaaaacagctgcaagttgatgat
gagggactcgatttaacggatcgtcgtatcttaagaactatgattgaaggttatcgtgga
ggtcctgttggtattagaactttagctgctaatatcggtgaagatattgaaacaattgaa
tctttatacgagccatatttgcttcaacaaggatttattttacttactccgcgtggaaga
gtcgtcacggaaaaagcatatttgcaattaggccttcctattcctggtaaaaagtag
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