Lactobacillus intestinalis: KBW87_02715
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Entry
KBW87_02715 CDS
T08339
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
liq
Lactobacillus intestinalis
Brite
KEGG Orthology (KO) [BR:
liq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
liq03019
]
KBW87_02715
Messenger RNA biogenesis [BR:
liq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KBW87_02715
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
UTW40803
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All DBs
Position
592485..593462
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AA seq
325 aa
AA seq
DB search
MLKRLIDYNDGEELDLVVYIKNSQLRHTKNNKLYLALTFADGSGDIRGNYWDADQRDADS
FSSGTIVELNGKREEYQGRPQIKIYSLRVVGPDEGYDLNQFVKSAPEKVDDMKEEINNYV
FKILNPTWNRIVRYLLEKWGKRFYDYPAGKSNHHAVRGGLAYHTLSMLRDADGISRNYPQ
VNQSLLFAGCILHDMGKVLELSGPAATQYTAEGNLIGHLVLIDEQIMMAAQKLHLDLESE
DLLLLRHMVLSHHGKFEYGSPKLPGLLEAELLHRIDDLDATVYAVTNALQHTKPGNFTEP
LMSQDGKRFYRPKVDEALDNSRKLE
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcttaaaaggttaatcgactataatgatggcgaggagctagatttagttgtttatatc
aagaattcgcaacttcgtcataccaaaaataataagttgtatctggctttgacctttgca
gatgggtcaggagatatccgtggtaattattgggatgcagaccagcgcgatgctgatagc
tttagttcagggacaattgtggagctgaatggtaagcgagaagagtatcaaggacgccct
caaattaagatttattctttgagagtggtgggacctgatgaaggatatgatttgaaccaa
tttgtaaaatcggcccctgaaaaagtcgacgacatgaaggaagaaatcaataattatgtg
tttaagattctaaatcctacctggaatcgaattgtacgctacttgcttgagaagtggggc
aagcggttttatgattatcctgctggaaaaagcaaccaccatgcagtaagaggtggtctc
gcatatcatactttatccatgcttagggatgcagatgggattagtagaaattatccgcaa
gtaaatcaatctttactttttgcgggatgtattttgcatgatatggggaaggttctagaa
ttaagtggtccagcagctacccaatatactgcagaaggaaacttgattggccacttggtt
ttaattgatgaacaaattatgatggctgcgcaaaaacttcatcttgatcttgaaagtgaa
gatttgcttttgcttagacacatggtcttgtctcaccatggtaagtttgaatatggttca
ccaaagttgcctgggctccttgaggcagaactcctgcatagaatcgatgatttagatgcg
acagtttatgccgtgacaaatgcgctacaacatactaaaccgggcaactttaccgagcca
ctcatgagtcaagacggcaagcgattctatcgtcctaaagtggatgaagcactagataat
tcaagaaaattagagtaa
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