Lactobacillus intestinalis: KBW87_02780
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Entry
KBW87_02780 CDS
T08339
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
liq
Lactobacillus intestinalis
Pathway
liq03030
DNA replication
liq03410
Base excision repair
liq03420
Nucleotide excision repair
liq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
liq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KBW87_02780 (polA)
03410 Base excision repair
KBW87_02780 (polA)
03420 Nucleotide excision repair
KBW87_02780 (polA)
03440 Homologous recombination
KBW87_02780 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
liq03032
]
KBW87_02780 (polA)
03400 DNA repair and recombination proteins [BR:
liq03400
]
KBW87_02780 (polA)
Enzymes [BR:
liq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KBW87_02780 (polA)
DNA replication proteins [BR:
liq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
KBW87_02780 (polA)
DNA repair and recombination proteins [BR:
liq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
KBW87_02780 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KBW87_02780 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
Polysacc_deac_2
HHH_2
DUF61
HHH_5
Motif
Other DBs
NCBI-ProteinID:
UTW40816
LinkDB
All DBs
Position
604028..606691
Genome browser
AA seq
887 aa
AA seq
DB search
MAQKKLLLIDGNSVAFRAFYALYRQLDRFVSPDGLHTNAIYTFKNMLDAILKQVDPTNVL
VAFDAGKVTFRTKMYEDYKGGRQKTPSELLEQLPVIREMLKDLGIKSYELANYEADDIIG
TLSKMGEKAGYEVTIVTGDKDLTQLASDKTTVLITKNGVGDTEAYTPEHMKEVNGVTPIE
FIDMKALMGDNSDNYPGVTKVGPKTASRLIQKYGSIENLYAHLEEMKKSKLKENLINDKD
KAFLAKKLATIDRDSPVEVTLEDTEKKDIDYEKLRELYERLGFKKFLAELNSSADAQGEN
TGVEQYEYVELTKDNLDELADIKEKEVDFYLEMLGDNYHVAPFVGFGLRVGKKNYVSKDI
ALLQEMPLRGILENKTIKKNVFDLKRTYVGLHRLNIEAGGFDYDMLLASYLVNNENNSND
LGEIAHLYDEYSVKTDLEVYGKGKKQAVPEDADLFKHLAAKVSVIQKLKPELLKKLKDHE
QDDLYDAIEIPVAFVLAKMEISGMKVLPSTLLQLENDFAIKLKDLENKIYQQAGEEFNIN
SPKQLGHILFEKLGLPPVKKTKTGYSTSVEVLDKLKTESPIINQILDYRQIAKIQSTYVK
GLLDVIQSDGRVHTRYLQTLTATGRLSSVDPNLQNIPTRTEEGKQIRKAFVPTDPDGYIF
SCDYSQVELRVLAHVSGDENMQEAFKTGYDIHSHTAMKIFHLDSPDQVTPLMRRHAKAVN
FGIVYGISDYGLAKNLGISRKQAKEFIDNYFEQYPKIKEYMDKAVKFAREHGYAETIMHR
RRYLPDIHAKNFNVRSFAERTAINSPIQGSAADIIKIAMINMQKKLEELHLKTKMVLQIH
DELVFDVPKEELETIKKIVPEVMQSAVKLDVPLVADSGYGHNWYDAK
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atggcacaaaagaaattgcttttaattgacggaaattcagtggcctttcgtgccttttat
gctttataccgtcagcttgatcgttttgtaagtcctgatggtttacatactaatgcaatc
tatacttttaaaaatatgctcgatgcaatcttaaaacaagttgatcctactaacgtctta
gttgcatttgatgcgggaaaagtaacttttagaaccaaaatgtatgaggactacaaaggt
ggtcgtcaaaaaacaccaagtgaattacttgaacaattgccggtaattcgagaaatgttg
aaagatttgggcattaaaagctatgaattagctaattatgaagcagatgatattattgga
accctttctaagatgggtgaaaaagctggttatgaagtgaccattgtcacaggagataaa
gatttaactcagctggcttcagacaagacaacagttttaattactaaaaatggggttggt
gatacagaagcttacacccctgaacacatgaaagaagttaatggggttacaccaattgaa
ttcattgatatgaaggctttgatgggcgataattctgataattatcccggtgttactaaa
gttggcccgaagacagcgtcacgcttgattcaaaaatatggttcaattgaaaatctttac
gcccatctagaagaaatgaaaaagtcaaagctaaaagaaaacttgatcaatgacaaggac
aaggcctttttagcaaaaaaattagcaacaattgatcgtgattctccagttgaagttact
cttgaagatactgagaaaaaagatatcgattatgaaaagttgcgtgaactttatgaacgt
ttgggattcaagaagtttttggctgaacttaattcttcagctgatgctcaaggagaaaat
accggggtagagcaatatgaatatgtggagttaactaaagataatctagacgaattggct
gacataaaagaaaaagaagtcgatttttatttagaaatgcttggcgataattatcatgtt
gctccgtttgttggttttggtttaagagttggtaaaaagaactatgtttcaaaagatata
gctcttttacaagaaatgcctttaagaggaattttagaaaataagactatcaagaaaaat
gtttttgatcttaagagaacctatgtagggctacatcgattaaatattgaagcgggtggt
tttgattatgatatgcttttagcttcctatttagttaataatgaaaataattctaatgat
ttaggcgagattgcccatttatatgatgaatattccgtaaaaactgatcttgaagtttat
ggtaaaggcaaaaagcaggctgtgccagaggatgcggaccttttcaagcatttagcggct
aaagttagcgtgattcaaaagttaaaacctgaactacttaaaaagttgaaagatcatgag
caagatgatctttatgatgcaattgaaattccggttgcatttgttcttgcaaaaatggaa
attagtggaatgaaagttttgccaagtacacttttgcaactagaaaatgattttgcaata
aaattaaaggatcttgaaaataagatttatcagcaagcaggagaagaatttaatattaat
tcacctaagcagttgggacatattttatttgaaaagcttggtctgccccctgttaagaaa
actaaaaccggctattcaacctctgtagaagttttggataagttgaagacggaaagtccg
atcattaatcaaattttggattatcgtcaaattgcaaaaattcaatcaacttatgtaaag
gggttgcttgatgtaattcaatcagatggtcgcgttcatactcgttatctccaaacttta
acagccactggtcgtttatcctcagttgatcctaacttgcaaaatattccaactcggact
gaagaaggaaagcaaattagaaaggcttttgtaccaactgatccagatggctatattttc
tcatgtgactattctcaagttgaattgcgtgttttggcccatgtttcaggggatgaaaat
atgcaagaagccttcaagactggctatgatattcactctcatacagccatgaaaatcttc
catcttgattctccagatcaagttacaccccttatgcgtcgacatgcaaaggctgttaat
tttgggattgtgtacggtatttctgattatggtttagctaaaaacttgggaatttctcgt
aaacaagctaaggaatttattgataattactttgaacaatatcctaagattaaggaatac
atggataaggctgtaaagtttgctcgtgaacatggctatgcagaaactatcatgcataga
agaagatatctgcctgatattcatgctaagaactttaatgtacgtagttttgctgagaga
actgcaattaattctccgattcaaggatcagcggcggatatcattaagatagcaatgatt
aatatgcaaaagaaacttgaggagcttcatttgaagactaaaatggttttgcagattcat
gacgaattggtctttgatgtgccaaaagaagaattagaaactattaaaaagattgtccca
gaagtaatgcaatctgcagtcaaacttgatgtgccattagtggcagattcaggttatggt
cataattggtatgatgcaaagtag
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