Lactobacillus intestinalis: KBW87_03445
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Entry
KBW87_03445 CDS
T08339
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
liq
Lactobacillus intestinalis
Pathway
liq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
liq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KBW87_03445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
liq03400
]
KBW87_03445
Enzymes [BR:
liq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
KBW87_03445
DNA repair and recombination proteins [BR:
liq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KBW87_03445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
DUF5780
Motif
Other DBs
NCBI-ProteinID:
UTW40939
LinkDB
All DBs
Position
741607..742260
Genome browser
AA seq
217 aa
AA seq
DB search
MKYPKELIDEVEKRSEGMKLEGLNKGAGPIHPALMIVGEAPGRNEIQTQVPFNGDSGKEL
MKSLASIGLRREDVYITSAVRSRPYSIKKVFSKKENKEVIKYPNRKPTKKEILAHAPFFD
YEIKKVQPKLIVAVGNTALERLLGPGYKISKEHGKVISNTPILQLNQNKDGYEWSNEKYT
IFPQYHPAAVFYNRKLAEDIARDWQVIGPYLKEKNYE
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatcctaaagaattaattgatgaagtggaaaaacgctcggaagggatgaaacta
gaagggttaaataaaggagcgggccctattcatccagcgcttatgattgttggagaagct
cctggacgaaatgaaattcaaactcaggttcctttcaatggagattccggaaaagaacta
atgaaatctttggcttcaatcggtttacgtcgagaagatgtgtatattacctccgctgtg
cgcagtaggccgtacagcattaagaaagtttttagtaaaaaagagaataaagaagtaata
aaatatcctaatcgaaaaccaactaagaaagaaattttagctcatgctccgttttttgat
tatgaaataaagaaggtacagcctaaattaattgtagcagtcggaaatacggcattagag
agacttttgggacctggctacaaaatttctaaggaacatggtaaagttattagcaatacg
cctattttgcaactgaatcaaaataaagatggttatgaatggtcaaatgaaaaatatacc
atctttccgcaatatcatcctgcagctgttttttataatcggaaattggcagaagatatt
gctcgagattggcaggttattgggccctatttgaaggagaaaaattatgagtaa
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