Lactobacillus intestinalis: KBW87_03580
Help
Entry
KBW87_03580 CDS
T08339
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
liq
Lactobacillus intestinalis
Brite
KEGG Orthology (KO) [BR:
liq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
liq03016
]
KBW87_03580 (truB)
Enzymes [BR:
liq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
KBW87_03580 (truB)
Transfer RNA biogenesis [BR:
liq03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KBW87_03580 (truB)
Prokaryotic type
KBW87_03580 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
ATP13
Motif
Other DBs
NCBI-ProteinID:
UTW40966
LinkDB
All DBs
Position
769898..770791
Genome browser
AA seq
297 aa
AA seq
DB search
MLNGIIVIDKDKGMTSADVVYHLRKALHIKKIGHAGTLDPEVTGVLPIAIGQATKLIELM
HTRPKAYTGSGLFGYATDSYDTDGKTLKENKLDHPFTKDEIRSAMHTFEGKIVQVPPIYS
AVKVNGKRLYEYAREGIEVERPKREVEVRKYELINEPKFNPQTGYQKFDFDIECSKGTYV
RSLVNDLGEKLNQPAVMTYLRRTASSGFDLSQAVKLSEVENNPGEVEKLIQPIDAFFKDY
ETIDLNQGQWLKVQNGATISLKTHAKKVALRYNNRVKAIYRNAGHYYRPELMLLKNE
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgttaaatggaattatagttattgataaagataaaggcatgactagtgctgacgtggtt
tatcatttaagaaaagcattgcatattaaaaaaattggacatgcaggaactttagatcct
gaagtaacgggagttttaccgattgcaattggtcaagcaactaaattaattgaattaatg
cacacacgtcccaaggcctatacagggagcggtctatttggatatgccactgatagttat
gatacggatggaaaaactttaaaagaaaataaattagatcatccttttactaaagatgaa
attcgatctgcgatgcatacttttgaagggaaaattgttcaagtgccaccgatctattct
gcggtaaaagttaatggaaaacgcttgtatgaatatgctcgtgaaggaattgaagtagaa
cggcctaagcgggaagtagaggtaagaaaatacgaattaattaatgaaccaaagtttaat
ccgcaaacaggctatcaaaaatttgattttgatattgaatgtagtaaggggacctatgta
agatctttggtaaatgatttaggggaaaaattaaatcaaccagcagttatgacctactta
cgcagaactgcaagttctggctttgatttgagccaagctgtaaaactaagtgaagtagaa
aataatcctggagaagtagaaaaactcattcaacccattgatgccttttttaaggattat
gaaactattgatttaaatcaaggacaatggctaaaagttcaaaatggagctaccatttct
ttgaaaacgcatgcaaaaaaagtggcattacgctacaataatagagttaaagcaatttat
cgtaatgcaggccattattatcgcccagagttaatgctgctcaagaatgaataa
DBGET
integrated database retrieval system
