Lactobacillus intestinalis: KBW87_03965
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Entry
KBW87_03965 CDS
T08339
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
liq
Lactobacillus intestinalis
Pathway
liq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
liq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KBW87_03965 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
liq03400
]
KBW87_03965 (recO)
DNA repair and recombination proteins [BR:
liq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
KBW87_03965 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
KBW87_03965 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
RecO_N_2
Motif
Other DBs
NCBI-ProteinID:
UTW39593
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All DBs
Position
868056..868808
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AA seq
250 aa
AA seq
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MRELKEVQGIVFKRRKYKDTDLIVKIMTKNNGIISLIVKGAMRPKSKLNAATLNFSYGTY
VIYTSGHGLSSLRTYKEVKQLDGIYDDLIKNAYASFILDLIDHAFVEYQSIGKYYDLADF
AIHKINEGVDPEIITQIVQMQLLTAFGVQPELHRCLICKKAEGIFDYSIKLGGIICSDHF
NDVQSRLYLKPKQTALLRTMGLVPIERLGKISLQSETKLATRKAIDRIYRETIDLNLKTK
KFLDEMKFFS
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaactaaaagaagttcaaggaattgtctttaaacgaagaaaatataaggatact
gatttaattgtaaaaatcatgactaaaaataatggcataatttctttaattgtgaaggga
gcaatgcggccaaaatcaaaattaaatgcggccactttgaatttctcatatggaacctat
gttatttatactagtggtcatggattaagtagcctgagaacttataaagaagtaaagcaa
cttgatgggatatatgatgacctaatcaagaatgcttatgcttcttttattttggattta
atcgatcatgcttttgtagaatatcaatcaattggaaaatattatgatttagccgatttt
gcaattcacaaaataaatgaaggtgttgatcctgaaattattactcagattgtccaaatg
caactcttaacggcttttggagtacaaccagaactgcaccgttgcttaatttgtaaaaaa
gcagagggaatatttgactattctattaagctgggtgggataatttgcagtgatcatttt
aatgatgttcagtcacgactctatttaaagcctaagcaaaccgctcttcttagaacgatg
ggattagtcccgattgaacgtttagggaagatttcacttcaatcagagactaaattggct
actagaaaggcaattgatcgaatttatagagaaacgattgatcttaatttaaaaacaaaa
aaattccttgacgaaatgaaattttttagttaa
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