Lactobacillus intestinalis: KBW87_04350
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Entry
KBW87_04350 CDS
T08339
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
liq
Lactobacillus intestinalis
Brite
KEGG Orthology (KO) [BR:
liq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
liq03032
]
KBW87_04350
03036 Chromosome and associated proteins [BR:
liq03036
]
KBW87_04350
03400 DNA repair and recombination proteins [BR:
liq03400
]
KBW87_04350
DNA replication proteins [BR:
liq03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
KBW87_04350
Chromosome and associated proteins [BR:
liq03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
KBW87_04350
DNA repair and recombination proteins [BR:
liq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
KBW87_04350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_euk_1
HU-CCDC81_bac_2
DUF2780
Motif
Other DBs
NCBI-ProteinID:
UTW39669
LinkDB
All DBs
Position
complement(955739..956014)
Genome browser
AA seq
91 aa
AA seq
DB search
MANKAELISEVAANTKLTKKQAAVAIDAIFSSIQNDLANGNKVQLIGFGTFEVRHRAARK
GRNPQTGAEIEIPASEVPAFKPGKALKDAVK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcaaataaagctgaattgatttctgaagtagctgctaacactaagttaactaagaag
caagctgctgtagcaattgatgctatttttagctcaattcaaaatgaccttgctaatggc
aataaggtacaattgatcggttttggtacttttgaagttcgtcaccgtgctgcacgtaag
ggtcgcaaccctcaaactggtgctgaaattgaaattcctgcaagtgaagttcctgcattt
aagccaggaaaggcacttaaggatgctgttaagtag
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