Lactobacillus intestinalis: KBW87_04450
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Entry
KBW87_04450 CDS
T08339
Symbol
rnz
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
liq
Lactobacillus intestinalis
Brite
KEGG Orthology (KO) [BR:
liq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
liq03016
]
KBW87_04450 (rnz)
Enzymes [BR:
liq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
KBW87_04450 (rnz)
Transfer RNA biogenesis [BR:
liq03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
KBW87_04450 (rnz)
Prokaryotic type
KBW87_04450 (rnz)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
PDEase_II
Motif
Other DBs
NCBI-ProteinID:
UTW39689
LinkDB
All DBs
Position
complement(974683..975618)
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AA seq
311 aa
AA seq
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MELQFLGTGAGQPSKQRNVSSLALKLLDELNEIWLFDVGEATQHQILKTNIRLRKVTRIF
ISHNHGDHIFGLPGLLATRSFQGDVGPITVYGPPGLEQFVKTALRVSRTKVSYPIKFVEL
TEGGLIYQGKGFRVYTEKLDHRVSSFGYRVVEDSRPGELLMSKLEKYNIPNGPLLGKLKN
GEQIVLSDGTVLDGKEFLGPERPGRIVTIIYDTRSTPNIAKLAQNADVLVHESTFAGNES
KLAHSYYHSTAVEAATVARDNGVKRLYLDHISARYLGSKAKQLEKQARKVFAHTKLVNDF
DRVNIPMKGTD
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggaattacaatttttaggtactggagcgggacaaccttcaaagcaaagaaatgtatca
agtctggctttgaaactcctagatgaattaaatgagatttggttgtttgatgtaggggag
gctactcaacatcaaattttaaaaacaaatatcagattacgcaaagtaactagaatattt
atttcacataatcatggtgatcatatttttggattgccggggttacttgcaacacgctct
tttcaaggggatgtaggtccaattactgtttatgggccaccaggactagagcaatttgtt
aaaacagccctccgggtttcacgaactaaggtatcttatccaattaagtttgttgaacta
acagaaggtggcttaatttatcaaggaaaaggctttagagtatatacagaaaaacttgat
caccgagtgtctagttttggatatcgagtagttgaagattcccgtcctggagaactttta
atgagtaaattagaaaagtacaatattcctaacggtcccttactaggaaagttaaaaaat
ggcgaacaaattgttttgtctgatgggactgtgttagatggtaaggaatttttgggacca
gaaagaccaggtcgaatagttactattatctatgatacgcgctcaactccgaatattgct
aagttagctcaaaatgctgatgtattggttcatgagtctacctttgcaggtaatgagtct
aagttagctcactcatattaccattcaactgcagttgaagctgctacagttgcgcgcgat
aatggggtaaaaagactatacttggatcatatttcagctagatatttaggttcaaaggct
aaacagcttgagaaacaagcacgcaaggtcttcgctcatactaagttagttaatgatttt
gatcgggttaatattccaatgaaaggtacagactga
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