Lactobacillus intestinalis: KBW87_04700
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Entry
KBW87_04700 CDS
T08339
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
liq
Lactobacillus intestinalis
Pathway
liq03030
DNA replication
liq03430
Mismatch repair
liq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
liq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KBW87_04700 (holA)
03430 Mismatch repair
KBW87_04700 (holA)
03440 Homologous recombination
KBW87_04700 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
liq03032
]
KBW87_04700 (holA)
03400 DNA repair and recombination proteins [BR:
liq03400
]
KBW87_04700 (holA)
Enzymes [BR:
liq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KBW87_04700 (holA)
DNA replication proteins [BR:
liq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KBW87_04700 (holA)
DNA repair and recombination proteins [BR:
liq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KBW87_04700 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_gamma3
Nab1
Glyco_transf_25
Attachment_P66
Shikimate_DH
DUF3567
HrpB2
Motif
Other DBs
NCBI-ProteinID:
UTW39738
LinkDB
All DBs
Position
complement(1027993..1028979)
Genome browser
AA seq
328 aa
AA seq
DB search
MTLLSLFNNTAADVPQTLIWGEDDFLNDYIARSYTREDKFKDLDRITVDCENDGLDELIA
NLTESSLFSAQKIVIVKNPFFLTSKVAKKFKKQLDQLQEIFSHINELDDVIVMVASYEKL
DKRKKITKTVMNNFNVINPKIKSYEVSAVAKSIIKAEGYIITQSALQLLVERSDQVMDTI
LSNYSKLKIVAQNQKITEKMVAENIELSLAQNVFEILEAAFNRNYQQALTRLENQLREGV
NPIQLLAVFESQIEVLLVVKVLAERSRSETQIVKELGIHPYRVKLALKKRIPIEKLEQML
EKAIELDFKYKNGTYQSDEFLKMYILNA
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
gtgactctactctcattatttaacaatactgcagccgatgttccccaaaccttgatttgg
ggagaagatgattttttaaatgattatatagctcggtcttatactagagaagataaattt
aaggacttagatcgaattacagttgactgtgaaaacgatgggttggatgaattaatagct
aatttaaccgaatcaagcttatttagtgcacaaaaaatagttattgtaaagaatccgttc
tttttaacttctaaagtagctaagaaatttaagaagcagctagatcaattgcaggagatt
ttttctcatattaatgaacttgatgatgttattgtaatggttgcatcttatgagaaactt
gataaacgcaaaaagatcacaaaaaccgtgatgaataattttaatgtgatcaatccgaaa
attaaatcctacgaagttagtgcagttgctaagtcaataatcaaagcagaaggatatata
attacccagtctgctttgcaattactcgtagaacgtagcgatcaagtaatggatacaatt
ttaagtaattacagtaaacttaaaattgtagcccaaaatcaaaaaattaccgaaaaaatg
gtggctgaaaatatcgaactttctttggctcaaaatgtatttgaaattttagaagcagct
tttaatagaaattatcaacaagctcttactcgactcgaaaatcaattgcgagaaggagtt
aatcctattcaactgttggcagtgtttgaaagtcagatagaggttctattagtagttaaa
gttttggctgagcgaagtcgaagtgagacccaaattgttaaagaattgggaattcatcct
tatcgtgtgaagttagctttgaaaaaaagaattcctattgaaaaattagagcagatgctt
gaaaaagcaatagaattagattttaaatataaaaatgggacttatcaatctgatgaattc
ttaaaaatgtatattctgaatgcgtaa
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