Lactobacillus intestinalis: KBW87_05030
Help
Entry
KBW87_05030 CDS
T08339
Name
(GenBank) rRNA pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
liq
Lactobacillus intestinalis
Brite
KEGG Orthology (KO) [BR:
liq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
liq03009
]
KBW87_05030
Enzymes [BR:
liq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
KBW87_05030
Ribosome biogenesis [BR:
liq03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
KBW87_05030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
RcsD_ABL
Motif
Other DBs
NCBI-ProteinID:
UTW39801
LinkDB
All DBs
Position
complement(1088930..1089637)
Genome browser
AA seq
235 aa
AA seq
DB search
MRIDKYLANMNVGSRKEVHKLIKDGLVTVNGDVVKTPKQKVEDHDEVMVGDEEIKYQQYH
YFLMNKPKGVLSATEDRSQRTVISLLEPQDRYQGITPVGRLDKDTTGLLLLTNDGQLNHA
LLAPNKHVDKVYWAKIAGVADESTVEKFAKGMTLGDGTELKPAQLKILKQDRENDSSEIK
ITISEGKYHQIKRMFGAEGMKVVELERLQMGKMTLGDLEQGEYRELSPEEVENIR
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgagaatcgataaatatttagcaaatatgaatgtgggctcgagaaaagaagttcacaag
ttgattaaggatggcttggttacggtaaatggcgacgtagtaaaaacgccaaaacaaaaa
gttgaggatcatgatgaagtgatggttggagatgaagaaattaagtatcagcaataccat
tactttttgatgaataagcctaaaggagttctttcggcaactgaagatcgcagtcaacga
actgtgatttcattgcttgaacctcaagatcgctatcaaggcattacgcccgtaggtcga
cttgataaagatacaacaggattgcttctgttaactaatgatgggcaattgaatcatgcc
cttcttgcaccgaataagcacgttgataaagtgtattgggccaagatcgctggagttgct
gatgaaagtactgttgagaaattcgctaagggaatgactttgggcgatggcactgaatta
aaaccagctcagctcaagatcttgaagcaagatagagaaaatgatagttcagaaattaaa
attactattagtgagggcaagtatcatcaaattaagagaatgtttggtgctgaagggatg
aaagtcgttgaacttgagcgccttcagatgggaaagatgactttgggagatttagaacaa
ggcgagtatcgtgaattaagccctgaagaagttgaaaatattagataa
DBGET
integrated database retrieval system
