Lactobacillus intestinalis: KBW87_05435
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Entry
KBW87_05435 CDS
T08339
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
liq
Lactobacillus intestinalis
Pathway
liq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
liq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KBW87_05435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
liq03400
]
KBW87_05435
Enzymes [BR:
liq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
KBW87_05435
DNA repair and recombination proteins [BR:
liq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KBW87_05435
Prokaryotic type
KBW87_05435
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UTW39873
LinkDB
All DBs
Position
complement(1161174..1161869)
Genome browser
AA seq
231 aa
AA seq
DB search
MKKLIGNDWDQILAPVFESEDYRNLHNFLKEEYSTKQIYPDMYHIFTAFKLTPFDKTKVV
ILGQDPYHNPGQANGMSFSVMPGTTLPPSLRNIYKELYDDVGARPVNHGYLKKWADQGVL
LLNAVLTVPYGHANGHQGKGWEKLTDEAIKKLSDRGKVVFILWGKFAQNKIPLIDQSKNF
IIKSSHPSPFSADRGFFGSRPFSRCNQALINFGETPIDWQLPETVTQQDLA
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaagttaattggtaatgattgggaccaaattttggctccagtttttgaaagtgaa
gattaccgtaatttgcataattttttaaaagaagaatattctactaagcaaatttatcca
gatatgtatcatatctttactgcttttaaattgacgccatttgataaaacaaaagtggta
attttggggcaggatccttatcataatcctggacaagctaatggaatgagcttctcagtc
atgcctggtacaacgcttccaccgtctttaagaaatatttataaagagttgtatgatgat
gtgggcgcacgtcctgttaatcatggttatcttaagaaatgggcagatcaaggagtttta
ctgctcaacgctgttttaacggtcccttatgggcatgcaaatggtcatcaaggaaaaggc
tgggagaagttaactgatgaagctattaagaaattaagcgatagaggaaaagtcgttttc
attttatggggcaaatttgctcaaaataagatcccattaattgaccaaagtaagaacttt
attataaaatcttctcatccaagtccattttcggctgatcgcggattctttggttcacga
cctttttcaagatgtaatcaagctttgattaattttggagaaactccgatcgattggcaa
ttaccagaaaccgtaacccaacaagatttagcatag
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