Lactobacillus intestinalis: KBW87_06125
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Entry
KBW87_06125 CDS
T08339
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
liq
Lactobacillus intestinalis
Pathway
liq03420
Nucleotide excision repair
liq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
liq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KBW87_06125 (pcrA)
03430 Mismatch repair
KBW87_06125 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
liq03400
]
KBW87_06125 (pcrA)
Enzymes [BR:
liq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KBW87_06125 (pcrA)
DNA repair and recombination proteins [BR:
liq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KBW87_06125 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
KBW87_06125 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
ResIII
Terminase_6N
YGR210-like_G4
AAA_16
FWWh
Motif
Other DBs
NCBI-ProteinID:
UTW40003
LinkDB
All DBs
Position
complement(1310073..1312307)
Genome browser
AA seq
744 aa
AA seq
DB search
MSEESILAGLNPQQKQAVKTTEGPLLVVAGAGSGKTSVLTRRIAYLVEEQGVGPWNILAI
TFTNKAASEMREREQKLLGPAADSIWMSTFHALCVRILRRDAEKIGYSNNFSIADPAEQL
TLIKHIEKDLNIDPKTYQPRKIISYISNAKNDLLTPKDYEENVASPFEKTTARIYHEYQK
RLKQDQIMDFDDLIMQTLRLFKEAPDVLHFYQNKFRYILVDEYQDTNEAQYQLTHALAAQ
YKNLCVVGDADQSIYGWRGANMENIMNFEQDYKKDGVQTVKLEQNYRSTGHILSAANSVI
QNNQNRKAKNLWTDQGDGQKVTYYKAQNGDDEAHYIISKVKEEVKDKNRNYKDFAVLYRT
NAQSRTVEEAFVKSNIPYQIVGGHKFYDRKEIKDVMAYLKLVANSADALSLNRIINVPKR
GIGAATVEKFFNFANSNQITPLSAMDNVDASDISTRAANKLKEFALKLHDAIAFAQNNNV
TDLTLKILEDFGYVDALKKENTIEAETRLENIDEFLSVTKRFEENYEPDEDESNPLSDFL
AEVSLLSDQDDLNDDGNQVTLMTLHAAKGLEFPVVFLIGMEDGLFPVARAMEENNIEEER
RLAYVGITRAKKELYLTSAFSRMRYGRVEYNPPSQFLNEIDEKDLEEEQSNSLNTVNNLI
EQAAPFSTKKQTARVYTSQAKKASGAVGAEKKGWSVGDQVEHKAWGRGVVVKVNGEGEDM
ELDIAFDGKGIKRLLAAFAPIKKV
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagaatctattttagctggattgaatccccagcaaaaacaagctgttaaaact
actgaaggcccgcttttagttgtagctggtgcaggaagtggtaagacttcagttttgacc
agaagaattgcctacttagttgaagaacaaggggtgggtccatggaatattttggccatt
accttcactaataaagcggccagtgaaatgcgcgaacgtgaacaaaaattattgggtcct
gctgctgatagtatttggatgtctacttttcacgcgttgtgtgtccgaattttacgtaga
gatgccgaaaaaatcggttatagcaataatttttcaattgctgatcctgcagaacaatta
accttgattaagcatattgaaaaagatttaaatattgatcctaaaacgtatcaaccacgt
aaaatcatttcttatatttctaatgctaagaatgatttattgactccaaaggattatgaa
gaaaatgttgcttcgccttttgaaaaaacaacggcaagaatttaccatgaatatcaaaag
cggctaaaacaagatcaaattatggattttgatgatttgattatgcaaactttgcgcttg
tttaaagaagcaccggatgttttacatttttatcaaaataagtttcgctatattttagtg
gatgagtatcaggatacgaacgaagcacaatatcaattaactcatgctttggcggctcaa
tataaaaacttgtgtgttgtcggggatgctgaccagtcaatctatgggtggcgtggtgca
aacatggaaaatatcatgaattttgagcaagattataaaaaagatggcgttcaaactgtt
aaacttgaacaaaattaccgctcaactggccacattttgtctgccgctaactctgttatt
caaaataatcaaaatcgcaaagctaagaatctttggactgatcaaggagatggacaaaaa
gtcacttactataaggcacaaaatggcgacgacgaagcgcattatattatttctaaggta
aaagaagaagtaaaagataaaaatcgcaactataaagactttgcagttttatatcggaca
aatgcgcaatcaagaactgtcgaagaagcctttgtaaaatcaaatattccttaccaaatt
gttggtggtcacaagttctatgatcgaaaagaaattaaagatgtaatggcatatttgaaa
ttggtggcaaattctgccgatgcattaagcttaaatagaatcatcaatgtgccaaagcgt
ggaattggagctgctacagttgaaaagttctttaattttgctaatagcaaccaaattacc
cctctttctgcaatggataatgtggatgcatccgatatttctactcgggcagctaacaag
ttaaaagagtttgctttaaaacttcatgatgcgattgcctttgctcaaaataataatgta
actgatctaactttgaagattctggaagattttggttatgtagatgctttaaagaaagaa
aatacaattgaagctgaaactcgtttagaaaacattgatgaatttttatcagtaactaag
cgctttgaggaaaactatgaaccggatgaagatgagtctaatccattatctgactttttg
gctgaggtttcattattaagcgatcaggacgatttaaatgatgatggtaatcaagtgact
ttgatgacacttcatgcagctaaagggctagaatttccagtagtatttttaattggaatg
gaagatggtttgttcccagtagcacgtgcaatggaagaaaataacattgaagaagaacga
cgattagcttatgtgggaattactagagcaaagaaagaactctatttgactagcgctttt
tctagaatgagatacggaagagtagaatacaatccaccttcacaatttttaaatgaaatt
gatgaaaaggacttggaagaagagcaatctaattctttgaatacagtcaataatttaatt
gaacaagctgctccattttctactaaaaagcaaacagctcgtgtatacacctctcaggct
aaaaaagcttctggagcagttggcgcagaaaagaaaggctggagtgttggtgatcaagta
gaacataaagcttggggtcgcggagtcgttgttaaggtcaatggcgaaggtgaagacatg
gagctagatattgcctttgatggcaaagggattaagagacttttagctgcctttgctcca
attaaaaaggtataa
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