Lactobacillus intestinalis: KBW87_07400
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Entry
KBW87_07400 CDS
T08339
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
liq
Lactobacillus intestinalis
Pathway
liq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
liq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KBW87_07400 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
liq03400
]
KBW87_07400 (xth)
Enzymes [BR:
liq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
KBW87_07400 (xth)
DNA repair and recombination proteins [BR:
liq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
KBW87_07400 (xth)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
TP_0983
Motif
Other DBs
NCBI-ProteinID:
UTW40201
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All DBs
Position
1558524..1559282
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AA seq
252 aa
AA seq
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MKFISWNVNGFRAALRHDFIGTFDKLDADIFGIQNIRLSQDEVHLQFPGYYEYWNYSDEK
GYDGVAIFTKKKPLAVTLGIGIPPYDRQGRTITLEYSNFYYINTYVPFSGEDLSRLGFRM
GWDDAFRAYVADLMKNKPVIIGGDMSVANEPIDLAEPDENRHHAGFTEQERSDFKKLLKL
GLVDTFRYMHPEKAGKYTYWSYRYNARSKNKGWRLDYFLVSDSLKSSIKKAKILSTIPGS
DHCPISLKLNMN
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttatttcgtggaatgttaatggctttcgcgctgctttaagacatgactttatc
ggtacttttgataaacttgacgcggatatttttggtattcaaaatattcgcctaagtcaa
gatgaagttcatctccagttcccaggctattatgagtattggaactattcagatgaaaaa
ggttatgatggtgtagctattttcaccaaaaagaagcctttagctgttactcttggaatt
ggtatccctccttatgatagacaaggacgcacaattactcttgagtactctaatttctac
tatatcaatacttatgtgccattttcaggtgaagacttatcccgtttaggctttagaatg
ggctgggatgatgcttttagagcatatgttgctgacttaatgaagaataaaccagtaatt
attggtggtgacatgagcgtggctaatgagccaattgatttggcggaacctgacgaaaat
cgtcatcacgcaggttttactgaacaagaacgcagtgatttcaagaaattacttaagctt
ggtttagtcgatacctttagatacatgcatcccgaaaaggctggcaagtatacttattgg
agctatcgttacaatgcacgttctaagaataaaggttggagattagattatttcttagtt
tctgattcacttaaatcaagcattaaaaaggccaaaatcttaagtacaattcctggctca
gaccactgtccaattagtcttaaattgaacatgaactag
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