Lawsonia intracellularis N343: LAW_00202
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Entry
LAW_00202 CDS
T02437
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
lir
Lawsonia intracellularis N343
Brite
KEGG Orthology (KO) [BR:
lir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lir03016
]
LAW_00202
Enzymes [BR:
lir01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
LAW_00202
Transfer RNA biogenesis [BR:
lir03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
LAW_00202
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Glyco_hydro_44
Motif
Other DBs
NCBI-ProteinID:
AGC49603
LinkDB
All DBs
Position
complement(250985..253057)
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AA seq
690 aa
AA seq
DB search
MVQHFVSHVGAGYLIEFMQDKEPQLAWVLEEFQNKFKILLPNRKEINIQSSRILPWIGPN
YRNIESKDIAIAHIEQHKFKRKELESSFNSYELWEIAQGEIIQAPAKWFSELVTTSPDID
TIAACAHVLLKDNIHFKFQSPNFEIYSKEIVDIRVKEQEKTIKQQAFITDSIPFFRYLWE
LYTQKKVYSINTANVYTQFEEQLRQIIMEQISNPEKADSQLWKKLVTGLPDDPFLALYLA
QAWGILQPHHNIWFERIDYDPTDNWQQPFQNTIDMLCKQSSLYTTSTLPLPFISIDSETT
KDKDDAFFIEPIDNGWKVVVALACPALNWPFDDPLDQAVRKRATSIYLPEASYNMLPNVL
GIDKYSLHAQCTRPVLIITCIVGYDGVVKSCTPSFESVSLAANLTYHECEYILEDNYSED
SPYAEQLKLAFHVAQTYQKYRLKHGAVIVERSEPYLSLIVEENETKVVLTEEFATPKSHL
LVSEIMILINAAIAHWSYENNISLFYRTQDIIIPDQYKGIWKEPHDIAKVVKVLAPSVLD
VVPKKHAGIGEKYYAPSTSPLRRYPDMVNQAQILHVLQHEKYKWSLKELEIMLPYITSRL
EYTNQIQRFRQRYWKLVYILQQDKNTWWPAIVTEVTEHYIVVNLPREQLTLRARRKLFTA
VPEIGQSIYIRIGNIQPLHNEIHILEIQQV
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggttcaacattttgtcagccatgtaggagctggttatcttattgaatttatgcaagac
aaagaacctcaacttgcttgggttcttgaagaatttcaaaataaatttaaaatattatta
cctaatagaaaagaaataaatatacaatcatcaaggattcttccttggataggtccaaac
tatagaaatatagaaagtaaagatattgcaatagcacacattgaacaacataagtttaaa
cgtaaagagcttgaatcatcttttaattcttatgaattatgggagattgctcaaggagaa
attattcaagcacctgcaaagtggttttctgagctagttacaacttctccagatattgat
acaatagcagcatgtgcacatgtccttttaaaggataatattcattttaaatttcaatca
cctaattttgaaatatattcaaaagagattgttgatattcgtgttaaagaacaagaaaaa
actataaaacagcaagcatttattactgatagtataccctttttccgttatttatgggag
ctttatacacaaaaaaaagtctattctattaatactgctaatgtttatacgcaatttgaa
gaacagcttcgtcagatcattatggaacaaatttcaaatccagaaaaagctgatagtcag
ttatggaaaaaacttgtaacaggacttcctgatgatccatttcttgctttatatcttgca
caagcatggggaatattacaaccacatcataacatttggtttgagcgtatagattatgat
cctacagataattggcaacaacctttccaaaacactatagacatgttgtgtaaacaatct
tctctttatacaacgtctaccctaccccttccctttataagtattgattcagaaacaaca
aaagataaagatgatgctttttttattgaaccaatagacaatggatggaaagtggttgtt
gcattagcctgccctgcattgaattggccatttgatgatccccttgatcaagcagttaga
aaaagagcaaccagtatttatttaccagaagcaagttataacatgttgcctaatgtatta
gggatagacaagtacagtcttcatgctcaatgtactcgacctgtgcttattattacatgt
attgttggctatgatggtgtagtaaaatcttgtacaccatcttttgaatctgtctctctt
gctgctaatcttacttatcatgaatgtgagtatattttagaggataactattcagaagat
tctccatatgctgaacaactgaagttagcttttcatgtagcacaaacctatcaaaaatat
cgtcttaaacatggtgctgttatagtagaacgttcagaaccatatctttctctaatagtt
gaagagaatgagacaaaagtagtattaacagaagagtttgctactcctaaatctcatctt
ttggtttctgaaattatgatccttattaatgcagcaatagctcattggagttatgaaaat
aacatttctcttttttatagaacacaagacattataattcctgatcaatataaaggtata
tggaaagagcctcatgatattgcaaaagtagtaaaagtgttagcaccatctgtacttgat
gtagttcccaaaaagcatgctggcatcggagaaaaatattatgcaccatcaacgtcacca
ttaagacgatatccagatatggttaatcaagcacaaattcttcatgtattacaacatgaa
aaatataaatggtctttaaaagagttagagataatgctaccttatattacttctcgtctt
gaatatacaaaccaaatacagcggtttcgacaaagatattggaagttggtatatattctt
caacaagataagaatacatggtggccagctattgttactgaggtaacagaacattacatt
gttgttaatttgccaagagagcaacttactcttcgggctcgtcgaaaactttttacagct
gttcctgaaataggacagtctatttatattcgtataggtaatattcaaccactacataat
gaaattcatatattagaaattcagcaagtctaa
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