Lawsonia intracellularis N343: LAW_00543
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Entry
LAW_00543 CDS
T02437
Symbol
fliA
Name
(GenBank) RNA polymerase sigma factor, FliA/WhiG family protein
KO
K02405
RNA polymerase sigma factor FliA
Organism
lir
Lawsonia intracellularis N343
Pathway
lir02020
Two-component system
lir02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
lir00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LAW_00543 (fliA)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LAW_00543 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lir03021
]
LAW_00543 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
lir02035
]
LAW_00543 (fliA)
Transcription machinery [BR:
lir03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LAW_00543 (fliA)
Bacterial motility proteins [BR:
lir02035
]
Flagellar system
Flagellar assembly proteins
Stator
LAW_00543 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
UPF0122
PhyR_sigma-like
GerE
Motif
Other DBs
NCBI-ProteinID:
AGC49942
LinkDB
All DBs
Position
complement(644468..645256)
Genome browser
AA seq
262 aa
AA seq
DB search
MAISNFSGKSSFSDNKPWEKLESGSVTWPDFSDLDQEAIVCHYAPKIRFLASRLKAKLPK
NIELSDLISAGSLGLMEALGRFRPQLGIRFETYAENRIKGAMLDELRKLDWFSRTLRQRI
RQIDGASWKIENEKGRPATEEELHEVTGLAIKDIRIGLEALQNNAFLSLDVIQDTVAHHT
SEKEGAPYEDTAATEIADRVSKLIDTLTDREKLVLSLYYSDELNMSEAASVMGITEGRVS
QLHSQALTRLRREFLNQYGKVD
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggcaatatcaaatttttctggaaaaagttccttttcagacaataaaccatgggaaaag
cttgaatctggttctgttacttggccagacttttctgaccttgatcaggaggctattgtt
tgtcattatgcacctaagattcgttttcttgcatcacgccttaaagctaagcttcctaag
aatatagaactttcagatttaattagtgctggatctttaggattaatggaagctctagga
agatttcgtcctcagctaggtattcggtttgaaacatatgctgagaatcgaattaaaggt
gctatgcttgatgagttacggaagttagattggttttctcgtacgttaaggcaacgtatt
cgtcaaattgatggggcctcatggaaaatagaaaatgaaaaaggtcgtccagcaacagaa
gaggagctacatgaagttactggattagctattaaggatattcgaataggacttgaagct
cttcagaataatgcttttttatctttagatgttattcaagatacagttgcacatcatact
tccgaaaaggagggtgctccatatgaagatacagctgctacagagatagcagatagagtt
tcgaaactcatagacacattgacagatagagagaagttggtattatcgctttattatagc
gatgagctaaatatgagtgaagcagcgtctgtaatgggtattacagaagggcgtgtttct
caattgcattcacaagcattaacaaggctcaggcgagagtttttaaaccagtatggtaag
gttgactaa
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