Lawsonia intracellularis N343: LAW_00696
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Entry
LAW_00696 CDS
T02437
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lir
Lawsonia intracellularis N343
Pathway
lir03420
Nucleotide excision repair
lir03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LAW_00696
03430 Mismatch repair
LAW_00696
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lir03400
]
LAW_00696
Enzymes [BR:
lir01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LAW_00696
DNA repair and recombination proteins [BR:
lir03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LAW_00696
MMR (mismatch excision repair)
Other MMR factors
LAW_00696
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
HHH
Motif
Other DBs
NCBI-ProteinID:
AGC50093
LinkDB
All DBs
Position
842271..844406
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AA seq
711 aa
AA seq
DB search
MFDTSTLNSAQLEAVTAPDGPVLVIAGAGSGKTRTIIYRLAWLAEQGIPPSSMLLLTFTR
KASQEMLHRATMLLNYSLGDVNGGTFHSIAFSTLRQYKPSWATGKVTIIDAQDTLTSLQH
CKEELKIAKGDRSFPKLQTVAALLSRARNKEITFKELIQKDSPHLISHIDSLTTLVERYT
TYKKQQNLLDYDDLLFEFELLLKGDESKNIPPLAPLFQERYQYIMVDEYQDTNRVQARLV
RLLSGNTNNTMAVGDDAQSIYAFRGATVNNILEFPNLFPGTKIIRLEENYRSTQPILDTA
NAILKESQEGFHKHLFTNRIGGEKVRLIRSLSDLTQANLIANRIKELLSIYPPKEIAILF
RAGYQSYHLEIALAKHTIRFRKYGGLKYTEAAHIKDMMAFIRLIVNPLDMPSFLRIAAFS
KGVGPKTAQKIYQIAAQGNFLELQKVCNKYPDLLSDMTLLDEIRQQPLEPTEILTKVFEH
YQPKLIVHFPEDWPRRQQGLEELIHIASAYTDLEQFIADLSLETPEEELNEEESIVLSTI
HSAKGLEWDAVIILDLVEDRFPSRHSLIRSEDFEEERRLMYVACTRAKKQLELSVPTTLY
NKQYGCNEPAIPSPFVQQLPSIVIEEWQEGYSGNIYKKITIPTNQPDSKTCSQIPASNNT
YNKEELSYSFCRHKIFGRGKIIEYLLPDKCRVNFPGFGLKVILKDYLTIED
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatacctctactcttaatagtgctcaacttgaagctgtcactgcaccagatggt
cctgtccttgttattgcaggagcaggtagtggtaaaactcgaactattatctatagactt
gcctggttagctgaacaaggtattcccccatcttctatgttacttcttacctttactcgt
aaagctagccaagaaatgcttcatcgtgctacaatgcttcttaattatagtcttggtgac
gttaatggtggaacattccatagcatagctttttctactctacgtcaatataaaccctcc
tgggcaacagggaaagtcactataatagatgcacaagacaccctaacttctctccaacac
tgtaaagaagaactcaaaattgctaaaggtgatcgttcgtttcccaaactacaaacagtt
gcagctttattaagtagagcaagaaataaagaaataacatttaaggaacttatacaaaaa
gactctcctcatcttatctcccatattgattcattaacaactcttgttgaacgttatact
acatataaaaaacaacaaaatttacttgattatgacgatcttctttttgagtttgaatta
cttcttaaaggtgatgaatcaaaaaacattcctccattagctccattatttcaagaacgt
tatcaatatattatggtagatgaatatcaagacacaaatcgtgtccaagcacgtcttgtt
cggcttctttctggaaacacaaataatacaatggctgtcggggatgatgcacaatctatt
tatgcttttagaggagcgacagtaaacaatatcctagaatttcctaatctattcccaggg
accaaaattatacgtctagaagaaaattatcgttctacccaacctatattagatacagca
aatgctatacttaaagagtcacaagaaggttttcataaacatttatttactaatcgtata
ggaggagaaaaagttcgccttatacgatcattaagcgatcttactcaggcaaatcttatt
gctaatcgaataaaagaattactatctatatatcctcccaaagaaattgcaatcctattt
agagcaggatatcaatcttaccatttagaaattgctcttgccaagcatactattcgattc
agaaaatatggcggcctcaaatatactgaagctgcccatattaaagatatgatggcattt
ataaggcttattgttaatccactagatatgccatcatttttacgtattgctgccttttca
aaaggagttggccccaaaacagctcaaaaaatttaccaaatagcagcacaaggaaatttt
ttagagcttcaaaaagtttgtaataaataccctgatcttcttagtgatatgactctactt
gatgagatacgacaacagcctttagaacctacagaaatattaaccaaagtctttgaacat
tatcaaccaaaacttatagtccatttccctgaagattggccacgccgtcaacaagggctt
gaagaacttatacatattgcttctgcctatacagatcttgaacaatttattgccgatctt
tctttagagactccagaagaagagctgaatgaagaagaaagcattgtgctttctactatt
cattctgcaaaaggtcttgaatgggatgctgttattatccttgacttagtagaagataga
tttccttctagacattcgcttatacgctctgaagattttgaagaagaaagacgccttatg
tatgtagcatgtactagagccaaaaaacagcttgaactttctgttcctactacactctat
aataaacaatatggatgcaatgaacctgcaatcccaagcccttttgtacaacaacttcca
agtatagtaatagaggagtggcaagaaggttattcaggcaacatatataaaaaaattaca
atacctactaatcaaccagatagcaaaacatgttcccaaatacctgcttctaacaataca
tataataaagaagagttatcttatagtttttgtcgacacaaaatttttggtagaggtaaa
attatagaatatttattacctgataaatgtagagtaaacttccctggatttggccttaaa
gttatcttaaaagactacctaactattgaagattaa
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