Leptospira interrogans serovar Linhai: LIL_10222
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Entry
LIL_10222 CDS
T03859
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lis
Leptospira interrogans serovar Linhai
Pathway
lis03030
DNA replication
lis03430
Mismatch repair
lis03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LIL_10222 (dnaE)
03430 Mismatch repair
LIL_10222 (dnaE)
03440 Homologous recombination
LIL_10222 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lis03032
]
LIL_10222 (dnaE)
03400 DNA repair and recombination proteins [BR:
lis03400
]
LIL_10222 (dnaE)
Enzymes [BR:
lis01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LIL_10222 (dnaE)
DNA replication proteins [BR:
lis03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LIL_10222 (dnaE)
DNA repair and recombination proteins [BR:
lis03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LIL_10222 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
tRNA_anti_2
HROB
Motif
Other DBs
NCBI-ProteinID:
AJR12824
LinkDB
All DBs
Position
1:252781..256302
Genome browser
AA seq
1173 aa
AA seq
DB search
MSLTMQDFAHLHLHTNYSMLDGAIRIKELMQHVKECGMSSVAMTDHGNMFGAVEFYNEAI
KQGIKPIIGSEFYVSPNRKQETEMVKIADGNAYHLILLAKNEEGYKNLIRLSSKSYTEGF
YKKARIDYDLLDRHSEGLVCLTACLAGEVNRKILEGKIDESFQLAGKLNEIFRKEDFYME
IQNHGIPEQMTVAKQVYEFGKKTGIPLVVTNDSHFLKKNDQEAQDILLRIGMQKRITDPM
EFGFNGEFYVKNGDEMAKIFPEIPEAFYNTLEISNKVNLKLQFGNYLLPEFEVPEGYDAD
SYLEKLIWEGIERKYPNLSPEIKERVIFELNTIKNMKFAGYFLIVQDYINYAKRNGIPVG
PGRGSAAGSIVAYALGITNVEPLQHNLLFERFLNPDRKDMPDIDTDFCVERREEVINYIR
RRYGEEKVGQIITFNSLAAKAALKDVARVLNLPFGEANEMTKAFPNKLGMSISEALSTSS
ELKNFSEKDDINHKIFAIAQRLEGNYRQPGRHAAGVVISPYPLEEVVPLSTVAEKEKPGV
RAIVTQYDKNNLESIGLIKMDILGLKNLTTLDYAIKLIEQRRGIRINLDEISYDDANTYS
LLRKANTLGIFQLESTGITDLVAKSQVSNFDEIVALIALYRPGPMGEGMLDEYLDRKSGK
KQVTYPHPSCEPILKETFGVPVYQEQVMSISRVVGGFSVGDSDVLRKAMAKKKADLMDKL
KVQFVEGAVKQGIQEKVAKDLFEQLERFGGYGFNKSHSVAYAIITYQTAYLKANYTIEYL
TALLASDHGKTTDIVKYINNAREMGIQILNPDVSESQASFSVIDNTTIRFGLSAMKGVGE
TAANSIIQARTKVGSFRTLQDFALNIDTRLINKKVFEALIQAGALDSFGYTRKCLFESVD
SILTFAQKEQERANEGQFSLFGNEESSFSLNLPKDALEWEIDEKLKREKAIAGLYLSGHP
LDKYEKQLKSLKTIPIEKFDDLKSGTKVEVAGVISSKNIKLSKRNEEFANFKLEDRTGEI
ECVAFAKTYQKYKEFIKEDQAIFIKGDLDKIEVGDAELRGQVKVNSIEILDDATIEDKLE
KSLHLRLEERHTEDPELVPKLYALLACYKGESSVYFHIVENQEEKRVIRAHDTYSIQPIN
ELFLRLADLLGDRSVFYSVGEQLKVINKSQAAG
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgtcccttacaatgcaggattttgctcatttacatctgcacacaaattattccatgctc
gacggagcgattcgtatcaaggagttgatgcaacatgtcaaagaatgcggcatgtcttcc
gttgccatgaccgaccacgggaacatgttcggagctgttgagttctataatgaggcgatc
aaacagggcatcaagccgattatcggaagcgaattttacgtttccccaaaccgtaagcaa
gaaacggagatggtaaagatcgcggacgggaacgcataccatctcatcctacttgcaaaa
aacgaagaaggttacaaaaatctaatacgtctttccagtaaatcctacacggaaggtttt
tataaaaaagcgagaatcgattatgatcttctggatagacatagcgaaggtcttgtttgt
ttgaccgcctgtcttgcgggtgaagtcaatcgaaagattttggaaggtaaaatagatgag
tcttttcaacttgctggtaagttgaatgagattttccgtaaagaggatttctatatggaa
atccaaaatcacggaattcccgaacagatgacagtcgctaaacaagtctacgagttcgga
aagaagaccggtattccgctcgttgttacaaatgattcccacttcttaaagaaaaacgac
caagaagcgcaagatattcttcttagaatcggaatgcaaaaacgtattaccgatcctatg
gaatttggttttaacggagagttctatgtcaaaaacggggacgagatggcgaaaattttc
cccgaaattccggaagcgttttataatacattagaaattagtaataaagtaaatttgaaa
cttcaatttggaaattatcttcttcccgaattcgaggttccagaaggttatgacgcggat
tcgtatcttgaaaaattaatttgggaaggaatcgaaagaaaatatccgaatctttctccg
gaaatcaaagaaagagtgatcttcgaactcaatacgatcaaaaatatgaagtttgcaggt
tactttttaattgttcaagattatattaactacgcaaaaagaaacggaattccggtcgga
ccaggaagaggttcggcagcaggttccatcgttgcttatgcactcggaatcacgaacgta
gaaccacttcaacacaatctactttttgaaagatttttaaacccggatcgtaaagacatg
ccggatattgatactgacttttgtgtggaacgcagagaagaagtaatcaattatatacgt
agaagatatggagaagaaaaagtagggcagatcatcacattcaattctcttgcagccaaa
gcggctctcaaagacgtagcacgggtattgaatcttccttttggagaagcgaatgaaatg
acaaaggcgtttccaaataaattaggaatgtctatttcagaagctttatccacttcttcc
gagttaaaaaacttttcggaaaaagacgatattaatcataaaatttttgcgatcgctcaa
agattagaaggaaattaccgtcagcctgggagacatgctgcgggtgtggtcatttctcct
tatcctttagaagaagtagttccactttccacggttgcggaaaaggaaaaaccgggtgtt
cgtgcgatcgtaactcaatacgataaaaataacttagaaagtatcggtcttatcaagatg
gatatcttgggtctaaaaaacttaacgaccttagactacgcgatcaaactcattgaacaa
agaagaggaattcggattaatctggatgaaatttcttatgacgatgcgaatacatactct
cttctcagaaaagcaaatactttaggtatattccagttagaatctactggaattacggat
ctggttgcaaagagccaggtaagtaatttcgacgaaattgtagccttgatcgctttgtat
cgtcccggtccgatgggagaagggatgttggacgaatacttggaccgtaaatctggaaaa
aaacaagtcacttatccacatccatcttgtgaaccaattttgaaagaaacattcggagtt
ccggtttatcaagaacaggtgatgagtatttcccgtgttgtcggaggattttcggtcgga
gattccgacgtattgcgtaaagcgatggcaaagaaaaaagccgatctgatggacaaactg
aaagttcagtttgtagaaggtgcggtcaaacaaggaattcaggaaaaggttgctaaggat
ctttttgaacagttggaaaggtttggtggttacgggtttaacaaatcgcattcggtcgct
tatgcgatcattacttatcaaacggcttacttaaaagcgaactatacaatcgaatatctc
acggctcttcttgcctccgatcacggtaaaacgactgacatcgtaaaatatatcaataac
gcaagagaaatgggaattcaaattctcaatccagatgtttccgaatcccaggcttctttt
agcgtgatcgacaatactacaattcgtttcggactttccgctatgaagggagtgggagaa
acagctgcaaacagtatcattcaagcgagaaccaaagtaggaagttttagaaccttacag
gacttcgcattaaatatagatacaagattgatcaacaaaaaagtttttgaagctctaatt
caagcgggagctttagattcttttggttatactcgaaaatgtctttttgaatctgtagat
tcgattttaactttcgcacaaaaagaacaagaaagagcaaatgaaggacagttttcactt
tttggaaacgaagaaagttctttttctcttaatcttcccaaagatgcgcttgaatgggaa
attgacgaaaagttaaaaagagaaaaagcaatagcaggtctttatctttccggtcatcct
ttggacaagtatgaaaaacaacttaaaagtttaaagacaatcccaatcgaaaaattcgat
gatttaaagtccggaactaaagtggaagttgcaggtgtaatttcttctaagaacatcaaa
ctcagtaaacgaaacgaagaatttgcgaacttcaaactagaagatagaaccggcgaaata
gaatgtgtagcttttgcaaaaacatatcagaaatataaggaatttataaaggaagatcaa
gctatctttatcaaaggcgacttggataaaattgaggttggagacgcggaacttcggggt
caggttaaagttaacagtatcgaaattttagacgacgcgacgatcgaggataaacttgaa
aagtcgcttcatcttagactggaagaaaggcatacggaagatcctgaactggttccgaaa
ctttacgcattgcttgcttgttacaaaggagaatcttccgtgtattttcacattgtggaa
aatcaagaagaaaaaagagtaattcgtgctcatgatacctactcgatccaaccgatcaat
gagcttttcttacgattggcagatcttttaggagatcgttccgtattttattctgtagga
gaacaactcaaagtgatcaataaaagccaggctgcaggttaa
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