Leptospira interrogans serovar Linhai: LIL_11665
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Entry
LIL_11665 CDS
T03859
Symbol
rpoN
Name
(GenBank) DNA-directed RNA polymerase sigma-54 subunit
KO
K03092
RNA polymerase sigma-54 factor
Organism
lis
Leptospira interrogans serovar Linhai
Pathway
lis02020
Two-component system
lis02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
lis00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LIL_11665 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LIL_11665 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lis03021
]
LIL_11665 (rpoN)
Transcription machinery [BR:
lis03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LIL_11665 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Sigma70_r4
HTH_IclR
MarR
HTH_3
Methyltransf_20
DUF5785
HTH_5
Motif
Other DBs
NCBI-ProteinID:
AJR14267
LinkDB
All DBs
Position
1:1980572..1981993
Genome browser
AA seq
473 aa
AA seq
DB search
MNLSQSLVQKQTQKLVMTQDLRQSIELLPLSTLELSDRINSELVENPMLEEEYASERNRT
PDLYSRDDLKRKEKNDFLKNSDVSWQDHFSLDKAGGAGTDASDRNQKYIESSPEKSSLSE
HLLWQLRLSNLKPDEISIGEILISMLDDHGFIPIPIPDLCTEMKLNEKKVRKVLDQIHRL
DPIGIGAKDVQETLLIQAKILKPEDSNLHILIRDHIKDLEKLDYKSISKKMEIQLESVES
LASEIKKLEPYPATLYTPNKPDYVIPDVIVREVDGEFDIYINDEWIPRLKVNKEYKNILK
NAKESDKEYIATKLSSAEWLIRSVNQRRQTLFKVTSAIIEMQIAFFKKGIQHIRPLTLKD
IAEKLEMHESTISRITSNKYIQTSRGIMELKWFFSSGVRSTEGGIESSKKIHDLIRNLVK
EEQSDNPLSDQEIVDAIGKQGIEIARRTVAKYRKILKILPSSQRKKVKSLESR
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
gtgaatctaagtcagtcactggttcaaaaacaaacccaaaaacttgtgatgactcaggat
ctaagacagtccatagaacttctacctttgtctactttagaactttctgatagaatcaat
tccgaacttgtagaaaatcctatgttggaagaagaatatgcatcggaaagaaatagaacc
cccgatttatacagtagagacgatttaaaaagaaaagaaaaaaatgattttctcaaaaac
tcagacgttagttggcaagatcatttttctttagataaggccggaggcgcgggaaccgac
gcgtcagatcgaaatcagaaatacatagaatcctcaccggaaaaaagctccttatccgaa
catcttctttggcagcttaggctttccaatttaaaacctgatgaaatttccataggagaa
attttgatttccatgttggatgatcatggatttattccgattccaattccagatttatgc
accgaaatgaagttgaatgagaaaaaagttcgtaaggtgttggatcagattcataggttg
gaccctatcggaattggagccaaggatgtacaggaaactcttctgatacaagccaagatt
ttaaaaccggaagattcaaatctacatattttaattcgggatcatattaaggatttagaa
aaattagattataagtctatttctaaaaaaatggaaatccagttagagtcggttgaatct
ctggcgtccgaaattaaaaagttagaaccttatcccgccacgttgtacactccaaataaa
ccggactatgtaattccagacgtgatcgtcagagaggtagacggggaatttgatatttat
atcaatgacgaatggattcctagacttaaagttaataaagaatataagaatattctaaaa
aatgcaaaggagtcagataaggaatatatcgctacaaaactaagttcggcggaatggttg
attcgttccgtaaatcaaagaagacaaactttgtttaaggtcacttcggcgattatagag
atgcaaattgcattttttaaaaaagggattcagcatattagaccactgactcttaaagac
attgctgaaaagttggaaatgcacgagtccacaatttccagaatcacttccaataaatat
attcagacttcgcgcggaattatggaattaaaatggttcttttcttccggggttcgttct
acggaaggtggaatcgaatcttctaaaaaaatacacgatcttatccgaaacttagtcaaa
gaagaacaatcggacaatcctctttcggatcaagaaattgtagatgcaataggaaaacaa
ggaattgaaattgcaagaagaaccgtcgctaaatatagaaagattttgaaaatcctacca
tccagccagagaaaaaaagtcaagtctttggagtctagataa
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