Leptospira interrogans serovar Linhai: LIL_11744
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Entry
LIL_11744 CDS
T03859
Symbol
uvrD3
Name
(GenBank) DNA helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lis
Leptospira interrogans serovar Linhai
Pathway
lis03420
Nucleotide excision repair
lis03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LIL_11744 (uvrD3)
03430 Mismatch repair
LIL_11744 (uvrD3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lis03400
]
LIL_11744 (uvrD3)
Enzymes [BR:
lis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LIL_11744 (uvrD3)
DNA repair and recombination proteins [BR:
lis03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LIL_11744 (uvrD3)
MMR (mismatch excision repair)
Other MMR factors
LIL_11744 (uvrD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
AAA_30
ResIII
AAA_11
CarD_TRCF_RID
HOOK_N
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
AJR14346
LinkDB
All DBs
Position
1:2061650..2063848
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AA seq
732 aa
AA seq
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MDSSFLSDLNEEQKKAVLQVNGPVLILAGAGSGKTRVITHRIANLLINHGIDRICAVTFT
NKAAAEMVERVKKIVPFLPANVQIKTFHSLCLYILRREASFFGFDNGFTIYDTTLQESLL
KQVIKDLSLDPKFYKPSTLGNYISGLKDKMLSPESYLEKEGRNDFSKAVSAIYKEYEKRK
DANYAFDFGDLIWKTVQLFQKSSDAISKYRHKWEYVMVDEYQDTNKVQYELVLLLAGEKR
NLCVVGDDDQSIYSWRGADIGNILNFEKDFPESVVIKLEENYRSTSNIILAASNVISNNT
QRKEKEIFTNNPEGAPVVLNEFENESEEAHGVITRIRSAYSGGTEYKNIAIFYRTNSQSR
YFEEALRNVGIPYKIFGGFRFFDRAEIKDLIAYLNVVSNPLDSVSLLRIINYPPRGIGDS
GVEKIREFSLEKGISILEVLGQEDIPLKKAAKSKGKELYNLFCDLIEKSEKGLSPSEIAL
ELLNRSGLMSHLKDEGTEESVARLENLQELVNSIEEYEKNSDSPSLEEYLNQISLITSEE
DSKELTDYVNLMTVHNAKGLEFEVVFLSGLEEGTFPHSMSLEESHFGDEEERRLFYVALT
RAREELFLSYCRTSRKFGKVEDRIPSRFLSEIPRECFGNRGYVSRERTARKPQGPPVASK
IRQANNELESHHAPPPDPNNLYLKPGDRVKHKQFGIGTILTISGREKNTKVAIRFGNVEK
NFFVAYTPLEKL
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
gtggactcctcatttttatccgatttaaacgaagaacaaaaaaaagctgtcttacaagta
aacgggccggttttaattttggcgggagcaggttccggtaaaacaagagttatcactcat
agaattgcaaatcttctaatcaatcatgggatcgatcgtatctgtgcagtaacctttacc
aataaggcggctgcggagatggtagaaagagtaaaaaaaatagttccttttttacccgca
aacgttcagatcaaaaccttccattctctttgtttgtatattttaagaagagaagcttcc
tttttcggatttgataacggttttacaatttatgataccactcttcaagaatcactttta
aaacaagtaattaaggatctttctttggatcctaaattttataaaccctccacacttgga
aactatataagcggtttgaaagataaaatgttgtctcctgaaagttatttggaaaaagaa
ggtcgcaacgatttttctaaggccgtatctgcaatttataaggaatacgaaaaaagaaag
gatgcaaattatgctttcgatttcggagatctgatatggaaaacggttcaactatttcaa
aaatcttcggatgcaatttctaaataccgtcataagtgggaatacgtgatggtagatgaa
tatcaagatacgaataaggttcaatacgaacttgtacttcttcttgcaggagaaaaaaga
aacctatgtgtggttggagacgatgatcaatctatttattcttggagaggagctgacata
ggaaacattctgaatttcgaaaaagattttccagaatcagtggtgatcaaactggaagaa
aactatcgttctacatctaatattatattagctgcttctaatgtaatttcaaacaacact
cagagaaaagaaaaggaaatatttacgaataacccggaaggtgctccggttgtgttaaac
gaatttgaaaatgaatctgaggaggctcacggagtgatcactagaatacgctccgcgtat
tctggcggaacggaatataagaatattgcaatattctacagaactaattctcagtccaga
tattttgaagaagctttgagaaatgtaggaatcccgtataaaattttcggaggtttccgt
ttttttgacagagcggaaattaaggatttgattgcatatttaaacgtggtttcgaaccct
ctggatagcgtttcgcttcttagaatcataaattatcctccgagaggaattggggattct
ggagttgaaaaaattcgagagttttcactcgaaaaaggaatttccattttggaagttttg
ggtcaagaagacattcctctcaaaaaagcagctaagtctaaaggaaaggaactttataat
ttattttgcgatttgatcgaaaaatcggaaaaaggtttgtctccttccgaaatcgcatta
gaacttttgaatcgttccggtctcatgtctcatctcaaagatgaaggaacggaagaatct
gtagctcgtttagaaaaccttcaagaattagtcaattcgatagaggaatacgaaaaaaat
tcggattctccttctttggaagaatatttaaatcagattagtttgattacaagcgaagaa
gattctaaagaactcaccgattatgtgaatctaatgactgtgcataacgcaaaaggactt
gaatttgaagtcgtttttctttctggattggaagagggaacttttccacatagtatgagt
ttagaagaatctcattttggggacgaagaagaaagaaggcttttttacgttgctcttact
cgggctcgtgaggaattatttctaagttattgtaggacttccagaaagtttggtaaggtg
gaagatagaattccttctcgatttttatctgaaattccaagggaatgttttggaaataga
ggttatgtaagtagagaacgaactgctagaaaacctcagggccctccagtggcttctaaa
attagacaagcgaataacgaattggagtcacaccatgcaccaccacctgatccaaataat
ctctatctaaaaccgggagatcgggtaaaacacaaacaattcgggataggaacaattttg
actatttccggtagggaaaaaaatacaaaggtcgccatccgttttggaaacgtagaaaag
aacttttttgttgcctataccccgcttgagaaattataa
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