Leptospira interrogans serovar Linhai: LIL_12260
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Entry
LIL_12260 CDS
T03859
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
lis
Leptospira interrogans serovar Linhai
Pathway
lis00521
Streptomycin biosynthesis
lis00523
Polyketide sugar unit biosynthesis
lis00541
Biosynthesis of various nucleotide sugars
lis01100
Metabolic pathways
lis01110
Biosynthesis of secondary metabolites
lis01250
Biosynthesis of nucleotide sugars
Module
lis_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
lis00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LIL_12260 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LIL_12260 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LIL_12260 (rfbC)
Enzymes [BR:
lis01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
LIL_12260 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AJR14862
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All DBs
Position
1:complement(2658873..2659433)
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AA seq
186 aa
AA seq
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MQFKKFQIEGPVLIEPKVFGDERGFFLETFKASIFEKENIPFQFSQDNHSRSSRGVLRGM
HLQIPPYDQGKLVRVVRGKVIDVVVDVRVGSPNYGKWLSVELSEENKNIFWVPPGFAHGF
LTLEDKTDFLYKVTGEYSPQNEVGIRWDDPALGIPWKTWLSDSEFIVSQRDQVTPFFADF
KSPFVY
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgcaatttaaaaaatttcagatagaaggtccagttttaattgaacctaaagtttttgga
gatgaaagaggtttttttttggagacctttaaggcatctattttcgaaaaagaaaacata
ccatttcaattttcccaagacaatcattctagatcttctcgaggggtattgagggggatg
catctgcaaattcctccttacgatcaaggaaagttagtccgagtagtgagaggtaaggtg
atagatgtggtggtagacgttagggtaggttcccccaattatggaaaatggctttccgtg
gaactgtctgaagaaaataaaaatatattttgggttcctcctggatttgctcatggattt
ttaaccttagaagataaaacagattttttatataaagtgaccggagaatacagtcctcag
aatgaggtaggaattcgttgggatgatcctgcgttaggtattccttggaagacatggttg
tctgattctgaatttatagtatctcagagggaccaagtgactcctttttttgcagacttt
aaaagtccattcgtatattag
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