Leptospira interrogans serovar Linhai: LIL_12774
Help
Entry
LIL_12774 CDS
T03859
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
lis
Leptospira interrogans serovar Linhai
Pathway
lis03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LIL_12774 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lis03400
]
LIL_12774 (recD)
Enzymes [BR:
lis01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LIL_12774 (recD)
DNA repair and recombination proteins [BR:
lis03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LIL_12774 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
AAA_22
NAT10_TcmA_helicase
UvrD-helicase
SH3_13
DEAD
AAA_12
UvrD_C
SLFN-g3_helicase
ResIII
ARM_LIN
nSTAND3
T2SSE
NPHP3_N
AAA_28
AAA
Motif
Other DBs
NCBI-ProteinID:
AJR15376
LinkDB
All DBs
Position
1:complement(3307822..3309660)
Genome browser
AA seq
612 aa
AA seq
DB search
MIFIEKLRTDILELIQSSEFEKKKLIKVSEEDSNYILEILNSIWEATQEGSLCVPVKQEW
EKILKIKLPGLVVDRFENTEWVYFEKTYHSKIELERLLKERIENDVLVNVDADRVEKILK
DLESKSFSLKKNQKKAIFSCLNSSFQIISGGPGTGKTTVVAFLLQILNELKQLPSPEKIA
LVAPTGRAAQRLTESVQENLKKISTSLENGFLRGQTIHGLLNYKQSLGGFYYNRERYLPH
RLIIVDEVSMVDLDLMLSLWNSIPKNETIQEGTIPFRFILIGDPHQLPSVEKGAVLSDFL
SVLESKRFHFVSKLEESNRQQPNTNGEVSKIVTLAEEILKYSPENLNLGTKIDESFPKTN
QIKENILYKSEVVWLQNIESSTSDYFSRDELVEKLWKEIFYPQIDRISSWKIQDSFCFDK
PDFIQKFQEELKRFRCLTIFRSGYWGVDAIQTKIMNLAAQNLFFGKGGNFFAKRLSKGIY
FVGLPILITRNDKSRKLFNGDIGIVLKTESTGELRAVFPIEGKLFQFALDTLPEHEPAFV
MSVHKSQGSEYDTILIYLPDSIEEEKSNGLLNRQVLYTAITRAKKQVILAGNPQTWEIGI
ANFQNRNTGFRI
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
ttgatttttattgaaaaactaaggacggatattttagaactgattcagtcatcggaattc
gaaaagaaaaaattaataaaagtatcagaagaggactctaattatatattagaaatattg
aattcaatttgggaggctactcaggaaggaagtttatgtgttcctgtaaaacaagaatgg
gagaaaattttaaaaataaaactccccggtcttgtcgtagatcggtttgaaaatacggaa
tgggtgtattttgaaaaaacgtatcattctaaaattgaattggaacgtcttttaaaagaa
agaatcgaaaatgatgttttggttaacgtggatgcggatcgagttgaaaaaattctaaag
gatctggaatcgaaaagtttttcgctgaaaaaaaatcaaaaaaaagcaatcttttcttgt
ttaaactcctctttccaaattataagtggaggacctggtactggaaaaacaaccgtagta
gcgtttttattacaaattttgaatgaattaaagcaacttccttctccagaaaaaattgca
cttgttgcaccgactggaagggcggctcagaggttaactgaatcggttcaagaaaattta
aaaaaaatctccacgtctctcgaaaatggatttctaagaggacaaacgattcacggactt
ttaaactacaaacagtcgttaggtgggttttattataatcgagaaagataccttccacat
agactaattatcgtggacgaagtttctatggtagatttggatctgatgctttctctttgg
aattcaattcctaaaaatgagacgattcaagaaggaaccattccgtttcggtttatattg
attggagatccgcatcaacttccttctgtagaaaaaggtgccgtgttaagcgatttttta
tccgtgttagaatctaaacgatttcattttgtttctaaattagaagaaagtaatcgtcag
caaccaaatacaaacggagaagtttcaaagatagtcacactcgcagaagaaattttaaaa
tattctcctgaaaatctaaacttaggaactaagatagatgaaagttttccaaaaacgaat
caaattaaagagaatattttatacaaaagtgaagttgtatggttgcaaaatattgaaagt
agcacttccgattatttttctagagatgagttagttgaaaaactttggaaagaaattttt
tatcctcaaattgatagaatctcttcttggaaaattcaggattctttttgttttgataaa
ccagattttattcaaaaatttcaagaggaactaaaacgatttcgttgtcttacgattttt
aggagtggctattggggagtggatgcgattcaaacaaagatcatgaatttggctgctcaa
aatcttttttttggaaagggcgggaacttttttgccaaacgactttccaagggaatttat
tttgtaggtcttcccattttaattactcgaaacgataaaagtagaaaactttttaacgga
gatattggaatcgtattaaaaacggaatctaccggagaacttagggcggtgtttccgatt
gaaggaaaactttttcagtttgcgttagacactcttccagagcatgaacctgcgtttgta
atgagtgtacataaaagtcaaggatcagaatatgatacaatcctaatttatcttccagat
tctatagaagaggaaaaatctaatgggttactcaatcgtcaagttctttatacagcaatt
acaagagctaaaaaacaagtgatcttggctggaaatccgcaaacctgggaaattggaatc
gccaattttcaaaatagaaatactgggtttagaatttaa
DBGET
integrated database retrieval system
