Leptospira interrogans serovar Linhai: LIL_12777
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Entry
LIL_12777 CDS
T03859
Symbol
recQ1
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lis
Leptospira interrogans serovar Linhai
Pathway
lis03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LIL_12777 (recQ1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lis03019
]
LIL_12777 (recQ1)
03400 DNA repair and recombination proteins [BR:
lis03400
]
LIL_12777 (recQ1)
Enzymes [BR:
lis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LIL_12777 (recQ1)
Messenger RNA biogenesis [BR:
lis03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LIL_12777 (recQ1)
DNA repair and recombination proteins [BR:
lis03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LIL_12777 (recQ1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Cas3-like_C_2
Helicase_C_2
Ig_CFAP65_8th
Motif
Other DBs
NCBI-ProteinID:
AJR15379
LinkDB
All DBs
Position
1:3316290..3317738
Genome browser
AA seq
482 aa
AA seq
DB search
MTSLSELKTLFGISSFRTSQEKIITDVLSGKNCMVIMPTGMGKSICYQIPALILEGLTIV
ISPLIALMQDQVLKLKQLGIEAGYINSSLSKQDRLQSYQYLKEGKYKIIYVSPERFRKNE
FLDCLKNRKISLLAIDEAHCISQWGHDFRPDYTKISEFREILGKPITIALTATATTEIQK
DMILQMGLENSEIIIYNEGICRPNLFLDVRTFVDEPSKSNAILELLKKQNGSTIVYFNLI
QNLEKFCEKLDIQKIEYQVYHGKLTTDQRKKVQNQFLKSNDKILLATNAFGMGVDKPNIR
TIIHAELPSSLESYYQEIGRAGRDGKPSDCHVFYNQDDLSVLMDFIEWQNPDAAFISRTF
QTLKRLGEELSSIDYEDLQSKIVFKNRGDHRLQTVLNLFDRYGVTSGELEKNSLKLISTL
PEALCSAELLELKKKTSLKRLYQMLLYLKSEKCRREFVYEYFDAKFSECGNCDICKNSSE
SK
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgacctctctttccgaactcaaaacccttttcggaatttcttcttttagaacctctcaa
gagaaaatcattacggatgttctctctggaaaaaattgtatggtgatcatgcctaccgga
atgggaaaatcgatctgttatcaaattccagcgcttattttagaaggattgacaatcgta
atttctcctttgattgcgcttatgcaagatcaagtgttaaaactgaaacaactcggaatc
gaagcgggctatatcaattcttctctttccaaacaagatagacttcaaagttatcaatac
ctaaaagaaggtaaatacaaaatcatatatgtttctccggaacgttttcgtaaaaatgaa
tttttagattgtcttaaaaacagaaaaatttctcttcttgcaatcgacgaagcccattgt
atcagtcagtggggacacgactttagaccagattacactaagatttctgagtttcgcgaa
attttaggtaaaccaatcacgattgcgttaaccgcaactgctacaaccgaaattcaaaaa
gacatgatccttcagatggggttagaaaattcggaaatcataatatacaacgaaggaatc
tgtagaccaaatctatttttagacgtaaggacatttgtagacgaaccttctaaatcaaac
gcaattctagaacttttaaaaaaacaaaatggaagtactatcgtttattttaatctcatt
cagaatttggaaaaattctgtgaaaagttagacattcaaaaaatcgaatatcaagtttat
cacgggaaattaactaccgaccaaagaaaaaaagtacaaaaccaatttttaaaatcgaat
gataaaattctgctcgctacaaatgcgtttggaatgggagtagataaaccaaatattaga
acgatcatccacgcggaactaccctcttctttagaaagttattatcaggaaattggaaga
gcgggaagagacggtaaaccttctgattgtcatgttttctataaccaagacgatctttct
gtattaatggattttatagaatggcaaaatccagacgcggcgtttatatctcgcacattt
caaaccttgaaacgtttgggagaagaattatcttcgattgattacgaagatttacaatct
aaaattgtttttaaaaatagaggagaccacagactccaaaccgttctcaatctatttgat
agatacggagtcacttcgggagaattagaaaaaaattctttaaaattaatttccactttg
cccgaagcgttgtgttctgcggagttattagaacttaaaaagaaaaccagcctaaaacgt
ctatatcaaatgcttctttacttaaaatcagaaaaatgcagaagagaattcgtctacgaa
tactttgacgccaagttttcggaatgtgggaactgcgatatttgtaaaaattctagtgag
tcaaaatag
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