Qingshengfaniella alkalisoli: FPZ52_00920
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Entry
FPZ52_00920 CDS
T06129
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lit
Qingshengfaniella alkalisoli
Pathway
lit03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lit00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FPZ52_00920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lit03021
]
FPZ52_00920
03400 DNA repair and recombination proteins [BR:
lit03400
]
FPZ52_00920
Enzymes [BR:
lit01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FPZ52_00920
Transcription machinery [BR:
lit03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FPZ52_00920
DNA repair and recombination proteins [BR:
lit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FPZ52_00920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Glyco_hydro_65C
Motif
Other DBs
NCBI-ProteinID:
QDY68322
UniProt:
A0A5B8IPY4
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All DBs
Position
170469..171485
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AA seq
338 aa
AA seq
DB search
MIQKNWQELIKPTQLEVKPGNEPARQATVVAEPLERGFGLTLGNALRRVLMSSLQGAAIT
SVKIDNVLHEFSSVAGVREDVTDIVLNLKGVAIRMDAEGTKRVSVSAQGPAIVTAGDIAE
TAGVEVLNKDHVICHLDDGADLFMELTVNTGKGYVAADKNRPDDAPIGLIPVDAIYSPVR
KVSYDVQPTREGQVLDYDKLTLKLDTDGSVTPEDAVAYAARILQDQLQIFVNFDEPEPAG
RDSEDDGLEFNPLLLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKS
LNEIKEVLSGMGLHLGMDVEDWPPENIEELAKKFEDQF
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgatccaaaagaattggcaagaacttatcaagccgacgcagcttgaagtaaagccgggc
aatgaacccgcgcgtcaggcgacggttgtcgccgaacctctggagcgtggcttcggcctg
acgctcggcaacgcgctgcgccgcgtcctgatgtcgtcgctgcaaggcgcagcgatcaca
agcgtcaagatcgacaacgtcctgcacgagttttcctccgttgcgggcgtgcgcgaagac
gtcaccgacatcgtcctgaacctcaagggcgttgcaatccgcatggatgccgaaggcacc
aagcgggtttccgtctcggctcaaggtccggccatcgtcaccgccggtgacattgccgaa
accgctggcgtcgaggttctgaacaaggaccatgtcatctgtcaccttgacgatggcgcc
gatctgttcatggaactgaccgtcaacaccggcaaaggctatgtcgcggccgacaagaat
cgcccggacgatgcgcctatcggcctgatcccggtcgatgcgatctattcgccggttcgc
aaggtcagctacgacgttcagccgacccgcgaaggtcaggttctcgactacgacaagctg
acgttgaaactggacactgacggttccgtcacgcccgaagatgcagtggcctatgctgcg
cgcatccttcaggatcagcttcagatcttcgtcaacttcgacgaaccagaacccgccggc
cgtgattccgaagacgatggtctggagttcaacccgctgctgctgaaaaaggtggacgag
ctggaactgtccgtccgttcggcaaactgcctgaagaacgacaacatcgtctatatcggc
gacctgatccagaaaaccgaagccgagatgctgcgcaccccgaacttcggccgcaagtcg
ctgaacgagatcaaggaagtgctctcgggcatgggtctgcatctcggcatggatgtggaa
gactggccgccagagaacatcgaagaactggcgaagaaattcgaagaccagttctaa
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