Qingshengfaniella alkalisoli: FPZ52_01165
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Entry
FPZ52_01165 CDS
T06129
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
lit
Qingshengfaniella alkalisoli
Pathway
lit03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lit00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FPZ52_01165 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lit03019
]
FPZ52_01165 (pnp)
03016 Transfer RNA biogenesis [BR:
lit03016
]
FPZ52_01165 (pnp)
Enzymes [BR:
lit01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
FPZ52_01165 (pnp)
Messenger RNA biogenesis [BR:
lit03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FPZ52_01165 (pnp)
Transfer RNA biogenesis [BR:
lit03016
]
Prokaryotic type
tRNA degradation factors
FPZ52_01165 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
BioW
Motif
Other DBs
NCBI-ProteinID:
QDY68365
UniProt:
A0A5B8I542
LinkDB
All DBs
Position
complement(215908..218046)
Genome browser
AA seq
712 aa
AA seq
DB search
MFNVTKKSMEWGNETLTLETGKVARQADGSVIATLGETSVMANVTFAREQKPGQDFFPLT
VHYQEKYYAAGKIPGGFFKREARPTEKETLTARLIDRPIRPLFVPGFKNEVLVMCTVLSH
DLVNDPDIVAMIAASAALTISGVPFMGPIAGARVGFANGEYVLNPDVEDMQDLRANPEQR
LDLVVAGTQDAVMMVESEAYELSEAEMLGAVKFGHDAIKPVIDLIVALAEDAAKEPFDFT
PPDYSELYEAVKAAGEDQMRAAFALTDKQERTTAIAEAREAIKSALTEEQLEDANLSSAF
KKLESSILRGDIISGGARIDGRDRNTVRPIVSEVGILPRTHGSALFTRGETQGLVVTTLG
TGDDEQFIDALHGNFKSNFLLHYNFPPYSVGEVGRVGSPGRREIGHGKLAWRALQAVLPA
PTDFPYTIRVVSEITESNGSSSMASVCGGSLSMMDAGVPLKAPVAGVAMGLILEDDGQFA
VLTDILGDEDHLGDMDFKVAGTSEGITSLQMDIKVAGITPEIMEQALAQAKDGRLHILGE
MSKAITEAGSFSTHAPRIETMNIPTDKIREVIGSGGKVIREIVETSGAKVDINDDGVIKI
ASSDGEAIQKAYDMIYSIVAEPEEGKIYKGKVVKIVDFGAFVNFFGKRDGLVHVSQIENR
RLNHPSDVLKEGQDVWVKLLGFDDRGKVRLSMKVVDQETGEEAKKEEEQAEE
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacgtcacaaagaaatcgatggaatggggcaacgagaccctcacgctggaaacg
ggcaaggttgcccgtcaggccgacggctctgtcatcgccactctgggcgaaacctccgtc
atggccaacgtcacgttcgcacgtgaacaaaagcccggtcaggactttttcccgctgacc
gtacattaccaggaaaaatactacgctgccggcaagatccctggcggcttcttcaagcgc
gaggcccgtccgaccgagaaggaaacgctgaccgcgcgcctgatcgaccgtccgatccgc
ccgcttttcgtacccggcttcaagaacgaagtgctggtcatgtgcaccgtgctgtcgcat
gacctggtcaacgatcccgacatcgtcgcgatgattgccgcatctgccgcgctgaccatc
tccggcgttccgttcatgggcccgattgcgggcgcacgcgtcggtttcgccaatggcgaa
tacgtgctgaaccccgatgtcgaagacatgcaggatctgcgcgcgaaccccgaacagcgc
ctcgacctggtcgtcgcgggtacacaagatgccgtgatgatggtcgaatccgaagcctac
gagctgtccgaggctgaaatgctcggcgccgtgaaattcggtcatgacgccatcaagccg
gttatcgacctgatcgttgctctggctgaagacgcagcgaaagagcccttcgacttcacc
ccaccggattattccgagctttacgaagccgtgaaggccgccggtgaagaccagatgcgc
gccgctttcgcattgaccgacaagcaggaacgcacgaccgccatcgcggaagcacgcgaa
gcgatcaaatccgcgctgaccgaagagcagctcgaggacgcaaacctcagctccgctttc
aagaagctggaatcgagtatcctgcgcggtgacatcatttcgggcggtgcccgtatcgac
ggtcgtgaccgcaacacggtgcgccccatcgtgtccgaggtaggcatcctgccccgcacg
cacggttccgcgctgttcacacgcggtgaaacgcagggtctggtcgtgaccacgctgggc
acgggcgatgatgagcagttcatcgacgcgctgcacggcaacttcaaatcgaacttcctg
ctgcactacaacttccctccctactcggtcggcgaagttggccgcgtcggttcgcccggt
cgccgtgaaatcggccacggcaaactggcatggcgcgcactgcaggcggttctgcccgca
ccgacggacttcccctacacgatccgcgtggtttccgagatcaccgaatccaacggctcg
tcctcgatggcgtccgtctgcggtggctcgctgtcgatgatggatgccggcgttccgcta
aaagcaccggttgccggtgttgccatgggtctgatcctggaagatgacgggcagttcgct
gtcctgaccgacattctgggtgacgaagaccatctcggcgacatggacttcaaggtcgca
ggcacctccgagggcatcacgtccttgcagatggacatcaaggtcgcaggcatcacgccc
gagatcatggagcaggcattggcccaagccaaggacggtcgtctgcacatcctgggcgag
atgtcgaaagccattacggaggccggcagcttctcgacccacgccccgcgcatcgagaca
atgaacatcccgaccgacaagatccgtgaagtgatcggttcgggcggcaaggtcatccgc
gagatcgttgaaacttcaggtgccaaggtcgacatcaacgacgacggcgtgatcaagatc
gcgtccagcgacggtgaagccatccagaaggcctatgacatgatctattcgatcgtggcg
gagcctgaagagggcaagatctacaagggcaaggtcgtgaagatcgtcgatttcggcgcc
ttcgtgaacttcttcggaaagcgcgacgggctggtccatgtcagccagatcgaaaaccgt
cgcctgaatcatccttccgacgttctcaaagaaggtcaggacgtgtgggtcaagctgctg
ggcttcgatgatcgcgggaaggtccgcctgtcgatgaaggttgtcgatcaggaaaccggc
gaagaagccaagaaagaagaagaacaagcggaagagtaa
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