Qingshengfaniella alkalisoli: FPZ52_04920
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Entry
FPZ52_04920 CDS
T06129
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
lit
Qingshengfaniella alkalisoli
Pathway
lit02024
Quorum sensing
lit03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lit00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FPZ52_04920 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FPZ52_04920 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lit03019
]
FPZ52_04920 (hfq)
03036 Chromosome and associated proteins [BR:
lit03036
]
FPZ52_04920 (hfq)
Messenger RNA biogenesis [BR:
lit03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
FPZ52_04920 (hfq)
Chromosome and associated proteins [BR:
lit03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
FPZ52_04920 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
Hfq_1
LSM
AcMNPV_AC11
Motif
Other DBs
NCBI-ProteinID:
QDY69035
UniProt:
A0A5B8I6C2
LinkDB
All DBs
Position
complement(952376..952609)
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AA seq
77 aa
AA seq
DB search
MAADKQNLQDAFLNHVRKAKVPVTIFLINGVKLQGVITWFDNFCVLLRRDGQSQLVYKHA
ISTIMPSQPISLYEGDN
NT seq
234 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgataaacaaaaccttcaggatgcgttcctaaaccatgtgcgaaaagccaag
gttccggtgacgatatttctgatcaacggtgtaaaacttcagggtgtaattacctggttc
gataatttctgtgtactgctacgtcgtgacgggcagtcgcaattggtgtataagcacgcg
atctcgacgatcatgccaagccagccaatcagcctatatgagggcgacaactga
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