Qingshengfaniella alkalisoli: FPZ52_05800
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Entry
FPZ52_05800 CDS
T06129
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
lit
Qingshengfaniella alkalisoli
Brite
KEGG Orthology (KO) [BR:
lit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lit03016
]
FPZ52_05800 (rnd)
Enzymes [BR:
lit01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
FPZ52_05800 (rnd)
Transfer RNA biogenesis [BR:
lit03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
FPZ52_05800 (rnd)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Sf6_terminase
YceG
Motif
Other DBs
NCBI-ProteinID:
QDY69194
UniProt:
A0A5B8IU82
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All DBs
Position
complement(1136974..1138131)
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AA seq
385 aa
AA seq
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MKTLLTTAELDVFCQEARRHPYVTIDTEFLRERTYYSKLCLIQMAFAGEGEENAVLIDPI
EGDVSLEPLYDLFRDTSVVKVFHAARQDLEIFFFDGAVLPTPLFDTQVAAMVCGFGEQVG
YETLVKKICKDQVDKSSRFTDWSRRPLTDAQKSYALADVTHLRQIYEYLDAQLKKSGRRK
WVEEEIETLLSPETYVVRPEDAWKRVKTRTQSGKFMAVVQKLAEFREAYAQERNVPRSRV
YKDDALLELASTKPRNEKDLGRSRLLLREARKGEIAEGILAAVSAGMAVEPEDAPKPDRS
REKLQVNPALADLLRVLLKAKAEESGVAQKMIASSADLDAISAGERDLPALRGWRAEVFG
DTALKMCDGGIALAAKGGKVRIVAL
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgaagacactcctgacgaccgcagagctggatgtattttgccaagaggcgcgcaggcat
ccctatgtgaccatcgacacggagttccttcgagagcggacctactattccaagctttgc
ctgatccagatggcgttcgcgggcgagggcgaggagaatgccgttctgatcgatccgatc
gagggcgatgtgtcgctggaaccgctctacgatctgttccgcgatacgtcggtcgtaaag
gtcttccacgcggcacggcaggatctggagatcttcttcttcgatggcgctgtgctgcca
acaccgctgtttgatacgcaggtcgcggcaatggtatgtggctttggtgaacaggttggt
tacgagacgctggtcaagaagatctgcaaggatcaggtggacaaatcctcccgcttcacg
gattggagccgccgcccgctgaccgatgcccaaaaatcctacgcgctggcggatgtgacg
catctgcgccagatttatgaatatctcgatgcgcaactgaagaaatcgggccggcgcaaa
tgggtcgaagaagagatcgaaaccctgctaagccctgagacctatgttgtgcggcctgaa
gatgcgtggaagcgtgtgaaaacgcggacgcaatcgggcaagttcatggcagttgtgcag
aagctggcggagttccgcgaagcctatgcccaggaacgtaacgtgccgcgcagccgcgtc
tataaagatgatgcgctgctggaactggcctcgacaaaaccgcgaaatgaaaaggatctg
gggcgctcgcgcctgttgttgcgagaggcacgcaagggtgagattgcggaaggtatcctg
gcggcggtttcagcaggcatggccgttgaacctgaggacgctcccaagcccgaccgcagt
cgcgagaagcttcaggtcaatccggcgcttgccgatttgcttcgggtgctactgaaggcg
aaggccgaagaatcgggcgtggcacaaaagatgatcgcttcttccgcggatcttgacgcg
atttcggccggggaacgcgaccttcccgcgttgcggggctggcgggccgaggtattcggc
gataccgcgctcaagatgtgtgacggcggtatcgctttggcagcaaagggcggaaaggtc
cgtatcgtggcgctttaa
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