Qingshengfaniella alkalisoli: FPZ52_06990
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Entry
FPZ52_06990 CDS
T06129
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
lit
Qingshengfaniella alkalisoli
Pathway
lit03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FPZ52_06990 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lit03400
]
FPZ52_06990 (uvrB)
DNA repair and recombination proteins [BR:
lit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FPZ52_06990 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FPZ52_06990 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
AAA_22
AAA
Kinesin
B2
DUF87
eIF3_p135
Motif
Other DBs
NCBI-ProteinID:
QDY69394
UniProt:
A0A5B8IUX1
LinkDB
All DBs
Position
complement(1367917..1370115)
Genome browser
AA seq
732 aa
AA seq
DB search
MTQAPDIPILHAAAPDVRNREKLEGGIRFRMQTEFSAAGDQPTAIAELAGGLVDGERDQV
LLGATGTGKTFTMAKVIEETQRPAIILAPNKTLAAQLYGEFKGFFPDNAVEYFVSYYDYY
QPEAYVARSDTYIEKESQINEQIDRMRHSATRALLERDDVIIVASVSCIYGIGSVETYGA
MTQDLHVGQEYDQRKIMADLVAQQYRRNDQAFQRGSFRVRGDVLEVFPAHLEDRAWRFSF
FGEELEAITEFDPLTGEKTDSFDQIRIYANSHYVTPKPTMQQAIIGIKKELRQRLDQLVG
EGKLLEAQRLEQRTNFDLEMLEATGVCNGIENYSRYLTGRAPGEPPPTLFEFIPDHAIVF
ADESHVSVPQIGGMYRGDFRRKSVLAEHGFRLPSCMDNRPLKFEEWDAMRPQSVFVSATP
SGWELEQTGGVFAEQVIRPTGLLDPQVEVRPVTTQVDDLLDEIRKVTAKDMRVLATVLTK
RMAEDLTEYLHEQGIRVRYMHSDIDTIERIEILRDLRLGAFDVLVGINLLREGLDIPECG
LVAILDADKEGFLRSETSLVQTIGRAARNADGRVIMYADKVTGSMQRAMDETDRRRAKQM
AYNEEHGITPATVRKNVDDILAGLYQGDVDMNRVTAVIDKPMHGANLEAHLDGLRQKMRE
AAENLEFEEAAQVRDEIKRLEAVDLAVSDDPLARQSAVEAATEAAVGARGRSTAGRPGQR
GGVKRRKSRKSG
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgacacaggctccggatattccgatacttcacgcagccgcccctgatgtgcgcaatcgc
gagaagctggaagggggcatccggttccggatgcaaacggaattcagcgccgctggcgac
cagcccacggccattgccgagcttgccggcgggctcgtggatggcgaacgcgatcaggtg
ctgctgggcgcaaccggcaccggcaagaccttcaccatggcgaaggtgatcgaggaaacg
cagcgccccgcgatcattctggccccgaacaagacgctggcggcgcagctctacggcgag
ttcaagggtttctttccggacaacgcggtcgagtatttcgtcagctattacgattactac
cagcccgaagcttatgtcgcacgcagcgacacctatatcgagaaggaaagccagatcaac
gaacagatcgaccggatgcgccactcggccacccgggcgcttctggaacgcgacgacgtg
atcatcgtggcctcggtgtcctgcatctacggtatcgggtcggtcgaaacctatggcgcg
atgacgcaggatctgcatgtcgggcaggagtatgaccaacgcaaaatcatggcggatctg
gtcgcgcagcaataccggcgcaacgatcaggcctttcagcgcggcagttttcgtgtccgc
ggtgatgtgctggaggtcttcccggcacaccttgaggacagggcctggcgcttttccttc
ttcggcgaagagctggaggcgatcaccgaattcgacccgctgaccggcgagaaaacggac
agcttcgaccagatcaggatttatgcgaattcacactatgtgacgccgaaaccgacgatg
cagcaggcgatcatcggcatcaagaaggaactgcgccaacggctcgatcagcttgtgggc
gagggcaagctgctggaggcccagaggctggaacagcgtacgaatttcgatctggaaatg
ctggaagccacgggtgtgtgcaacgggatcgaaaactactcgcggtatcttacaggccgc
gcgcccggggagccgccacccacgctgtttgaattcattcccgaccacgccatcgtgttt
gccgatgaaagccacgtctcggtgccccagatcggtggcatgtatcgcggtgacttccgc
cggaaatcggtgctggccgaacatggttttcgcctgccgtcctgcatggataaccgtccg
ctcaaattcgaggaatgggacgccatgcgcccgcaatcggtcttcgtatcggccacgccg
agtggatgggaactggagcaaaccggcggcgtgtttgccgaacaggtcatccgtcccacg
ggactgctggatccgcaggtcgaggtgcgtccggtcacgacgcaggtcgatgatctgctc
gacgagatccgcaaggtcaccgcaaaggacatgcgggttctggcgacggtgctgaccaaa
cgcatggcagaggatctgaccgaatacctgcacgagcagggcattcgtgtgcgctacatg
cattcggacatcgacacgattgagcggatagagatactgcgcgaccttcgtcttggggcc
ttcgatgtgctggtggggatcaacctgctgcgcgaaggcttggacatccccgaatgcggt
ctggtggccattcttgacgccgacaaggaaggcttccttcggtccgaaacatccttggtc
cagaccatcgggcgcgcggcgcgcaacgcggatgggcgcgtgatcatgtatgccgacaag
gttaccggatccatgcagcgggcgatggatgaaaccgatcgtcggcgtgccaagcagatg
gcctataacgaggaacacggaatcacgccggcaaccgtgcgcaaaaatgtcgacgacatt
ctagccgggttgtatcagggcgatgtggacatgaaccgcgtgacggctgtgattgacaag
ccgatgcacggggcgaacctggaagcgcatctcgacgggctgcgacagaaaatgcgcgaa
gcggcggagaacctcgaattcgaggaagccgcgcaagtgcgtgatgaaatcaagcgattg
gaggcggttgatcttgcggtcagcgatgatcccctcgcaagacagtcggctgtcgaggct
gccactgaggcggcggttggcgcgcgtggtcgttcgacggcgggccgtccggggcaaaga
ggcggtgtcaaacggcgcaagtcgcgcaagagcgggtga
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