Qingshengfaniella alkalisoli: FPZ52_07355
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Entry
FPZ52_07355 CDS
T06129
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lit
Qingshengfaniella alkalisoli
Pathway
lit03420
Nucleotide excision repair
lit03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FPZ52_07355
03430 Mismatch repair
FPZ52_07355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lit03400
]
FPZ52_07355
Enzymes [BR:
lit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FPZ52_07355
DNA repair and recombination proteins [BR:
lit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FPZ52_07355
MMR (mismatch excision repair)
Other MMR factors
FPZ52_07355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
AAA_11
DUF3553
Motif
Other DBs
NCBI-ProteinID:
QDY69462
UniProt:
A0A5B8IT80
LinkDB
All DBs
Position
complement(1462330..1464690)
Genome browser
AA seq
786 aa
AA seq
DB search
MSSQDDPAFNEAPLGYSLSQRAMAARPQPYLDGLNPAQREAVEMTDGPVLMLAGAGTGKT
RALTARIAHLLNTGLARPNEILAVTFTNKAAREMKERVARLLGQSVEGMPWLGTFHAINV
KLLRRHAELVGLKSNFTILDTDDQIRLLKQVINAANIDEKRWPARQLAGLIDNWKNRAWT
PENVPVAESSAFNSMGVDLYAAYQRRLKDLNAVDFGDLLLHMVTVFQKHEDVLRQYQRWF
RYILVDEYQDTNVAQYLWLRLLAAGHKNICCVGDDDQSIYGWRGAEVGNILRFERDFPGA
HVVRLEQNYRSTAHILGAASGVIRGNEGRLGKTLWTDRDEGEKLRLIGHWDGEEEARWVG
EEIEAMQRGTRGGRTYSADDMAILVRASHQMRAFEDRFLTIGLPYRVIGGPRFYERMEIR
DAMAYFRLATSPTDDLAFERIVNTPKRGLGDKAQQKIQRAARANGVPLLEGARLLIAADD
ISGKGKTELAKFVRQMDQWHAMALDPAQSHIELAELMLDESGYTTMWQNDKSPDAPGRLE
NLKELVKALEQFENLQGFLEHVALIMDNEQDSDEPKVSVMTLHAAKGLEFPVVFLPGWED
GLFPSQRSMDESGLKGLEEERRLAYVGITRAEEVCTISFAANRRVFGQWQSSLPSRFIDE
LPEEHVDVLTPPGLYGGGYGAAGMSNVSTLEEDAASRDVYNSPGWRRLQTRSAQAQRVTQ
RTSRVIDMTADSTFTVGERVFHQKFGYGSVVGIEGDKLNIAFEKAGAKHVVARFVTLAEQ
ADDIPF
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccaagatgatcccgccttcaacgaagccccgcttggatactcgctgtcgcaa
cgcgcgatggcggcgcgaccgcaaccctatctggacgggctgaaccccgcgcagcgcgaa
gccgtggagatgacggacggacccgtgctgatgctcgccggtgccgggacgggcaagacg
cgggcgctgacagcgaggatcgcacatctgctcaataccgggctggcgcgcccgaacgag
atcctggcggtcaccttcaccaacaaggctgcccgggaaatgaaggaacgtgtagccagg
ttgctcggccaatcggtggaagggatgccatggctcggcacgttccatgcgatcaacgtg
aaactgttgcgacgtcacgcggaacttgtagggctgaagtcgaacttcacgatcctcgat
accgatgaccagatcaggttgctcaagcaggtcattaatgctgcgaatattgacgaaaag
cgttggcccgcccgtcaactcgcggggttgatcgacaattggaagaaccgcgcatggaca
ccggaaaatgtgcccgtagcggaaagcagcgcgttcaacagtatgggcgtggatctgtat
gcagcgtatcagcgtcggctgaaggatctcaatgccgtcgatttcggtgatctgttgctg
cacatggtcactgtgttccagaagcatgaagacgtgttgcggcaatatcaacgctggttc
cgctacattctggtagacgaataccaagacacgaacgtcgcgcagtatctatggctgcgg
ctactggcggctgggcacaagaatatctgctgcgtcggtgatgatgatcagtcgatctat
ggctggcgcggggccgaggtcggcaacatcctacgctttgaacgcgatttccccggtgcg
catgttgtccgattggagcagaattaccggtcgaccgcgcatattcttggggccgcgtcc
ggtgtgatccggggcaatgaaggacgtttgggaaagacactttggaccgatcgggatgag
ggcgagaaactgcgtctcatcggccactgggatggcgaagaagaagcgcgctgggtcggc
gaagaaatcgaggcgatgcagcgtggtacccgtggcggtcgcacctatagcgcagatgac
atggcgatcctcgtcagggccagccaccagatgcgggccttcgaagaccgtttcctgacc
atcggcctgccttaccgtgtgataggcggcccgcgcttttacgagcggatggagatccgc
gatgccatggcctatttccggctggcgaccagcccgactgatgatctggccttcgagcgg
atcgtgaatacgcccaagcggggcttgggcgacaaggcgcagcagaagatccagcgggcg
gcgcgggcgaatggcgtgccgctgctggaaggggcgcggcttctgatcgcggcggacgat
atttcgggcaagggcaagacggaacttgcgaaattcgtgcggcagatggaccagtggcat
gcaatggcactcgatcccgcgcagagccatatcgaactggccgaactgatgctggacgaa
agcggctacaccaccatgtggcagaacgacaaatcacccgatgcgcccgggagattggag
aacctgaaagaactggtgaaggcgctggagcaattcgagaacctgcaaggcttcctcgaa
catgtcgcgctgatcatggataacgaacaggacagcgacgagccgaaagtgtcggtgatg
acgctacacgctgccaaggggctcgaatttcccgtggtctttctgcccggctgggaagac
ggtctgttcccgtcgcaacggtccatggatgaaagcggcctgaagggattggaagaagaa
cgccggcttgcctatgtcggcatcacgcgggcagaagaagtctgcacgatttcctttgcg
gcgaaccggcgcgtgttcggccaatggcagtcgtcattgccctcacgctttatcgacgag
ttgccggaggaacatgtcgatgtgttgactccgccgggcctgtatggcggcggatatggt
gctgcaggaatgtcgaacgtgtcgacgctggaagaagacgccgcgtctcgcgacgtctac
aattctccggggtggcggcggcttcagacacggtcggcgcaagcgcaacgcgtgacgcaa
cgcacatcgcgggtaatcgacatgaccgcggactcgaccttcacggtgggggaacgcgtc
ttccatcagaaattcggctatggctcggtcgtgggtattgagggcgacaaacttaacatc
gctttcgaaaaggcgggggccaagcatgtcgtagcaaggttcgtgactttggccgaacag
gctgacgacatccccttttag
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