Qingshengfaniella alkalisoli: FPZ52_12180
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Entry
FPZ52_12180 CDS
T06129
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
lit
Qingshengfaniella alkalisoli
Pathway
lit03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lit00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FPZ52_12180 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lit03019
]
FPZ52_12180 (groL)
03110 Chaperones and folding catalysts [BR:
lit03110
]
FPZ52_12180 (groL)
03029 Mitochondrial biogenesis [BR:
lit03029
]
FPZ52_12180 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lit04147
]
FPZ52_12180 (groL)
Enzymes [BR:
lit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
FPZ52_12180 (groL)
Messenger RNA biogenesis [BR:
lit03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
FPZ52_12180 (groL)
Chaperones and folding catalysts [BR:
lit03110
]
Heat shock proteins
HSP60 / Chaperonin
FPZ52_12180 (groL)
Mitochondrial biogenesis [BR:
lit03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
FPZ52_12180 (groL)
Exosome [BR:
lit04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
FPZ52_12180 (groL)
Exosomal proteins of other body fluids (saliva and urine)
FPZ52_12180 (groL)
Exosomal proteins of breast cancer cells
FPZ52_12180 (groL)
Exosomal proteins of colorectal cancer cells
FPZ52_12180 (groL)
Exosomal proteins of bladder cancer cells
FPZ52_12180 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QDY70462
UniProt:
A0A5B8IWC6
LinkDB
All DBs
Position
unnamed1:155549..157174
Genome browser
AA seq
541 aa
AA seq
DB search
MSAKEVKFGADSRGRMFKGINTLANAVKVTLGPKGRNVVLDKSWGAPRITKDGVTVAKEI
TLSDPFENMGAQMVKDVASRTNDEAGDGTTTATVLAQAIIKEGMKSVAAGMNPMDLKRGI
DKAVAAVVAEIKEMSRPVGDTDEIAKVGTISANGETAIGQQIADAMAKVGNEGVITIEEN
KGLETETEVVEGMQFDRGYLSPYFVTEAEKMTANLEDCVILMHDKKLTSLAPMVPLLEAV
MQADKQLLVVAEDIDGEALAMLVVNKLRGGLKVAGVKAPGFGDRRKAMLEDLAILTGGQV
IAEELGVKLENVTLDMLGVAKKITITKDTTTVIDGAGDKEAIAARVAQIRMQIEDTTSDY
DKEKLQERLAKLAGGVAVIKVGGATEIEVKERKDRVDDALNATRAAVQEGVVPGGGVALV
HAGKVLADLTGDNADQTAGIAIIRKALQSPLRQIAENAGVDGSVVAGKIVENASKTFGYD
AQADTYGDMLKAGVIDPTKVVRIALQYAASVAGLLVTTEAMIAERPTKSGNNEMADMDSM
M
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcaaaagaagtcaaatttggcgcggattcccgtggccgcatgttcaagggcatc
aatacactcgccaatgccgtcaaggtgacgcttggccccaagggccgcaatgtggttctg
gacaaatcctggggtgcgccacgaatcacgaaggacggtgtgaccgtcgccaaggaaatc
accctgtctgatccgttcgagaacatgggcgcgcagatggtcaaggatgtcgcatcgcgc
accaatgacgaggctggcgacggcacgaccaccgcaacagttctggcgcaagccatcatc
aaggaaggcatgaaatcggttgccgcgggaatgaacccgatggacctcaagcgtggcatc
gacaaggccgtggccgcagttgtcgctgagatcaaggagatgtcccgtccggttggcgac
acggatgagatcgcaaaggttggcacgatatcggccaatggcgaaactgcgattggtcaa
cagatcgcagatgcgatggcgaaagtcggcaatgaaggcgtcatcacgatcgaggaaaac
aagggtctcgagaccgagaccgaagttgtcgaaggcatgcagttcgatcgtggctatctc
agcccgtatttcgtcaccgaagccgaaaaaatgacagcgaacctcgaagattgtgtcatc
ctgatgcacgacaagaaactgacctcgctggcgccaatggtaccgttgcttgaggcggtc
atgcaggctgacaagcagcttttggttgttgctgaagatatcgatggcgaagctctcgcc
atgctcgtggtcaacaaactccgtggtggcctgaaggttgcaggcgtcaaggcccccggt
tttggggatcgtcgcaaggcgatgctggaagatctcgccatccttacaggtggccaggtg
attgccgaagaacttggcgtcaagctcgaaaatgtcactttggacatgctcggtgtcgcc
aagaaaatcacgatcaccaaggacacaacgaccgtgatcgatggggcaggtgacaaggaa
gccattgctgcgcgggtggcccagatccgcatgcagattgaagacacgacatcggactac
gacaaggaaaagctgcaggaacgtctcgcgaaactcgcaggcggggtcgccgttatcaag
gttggcggagcgaccgagatcgaagtgaaggaacgcaaggaccgcgtcgatgacgccttg
aacgcgacccgtgcggccgttcaggaaggtgtcgttcccggcggtggcgttgccttggtt
catgccggcaaagtgctggccgatcttacgggtgacaacgcggaccagacggctggcatc
gcgatcattcgcaaagccctgcagtcaccgctgcggcagatcgccgagaatgcgggcgtc
gacggatcggtggttgctggcaagatcgtcgagaacgccagcaagacgttcgggtacgat
gctcaggctgacacttatggcgacatgcttaaggcgggcgtcatcgatcccacgaaagtt
gtgcggattgcactccaatacgcagcctctgtcgcagggttgctcgtgacaaccgaggcg
atgattgccgaacggccgacgaaatcgggtaacaatgaaatggccgatatggacagcatg
atgtag
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